Paenibacillus polymyxa SC2: PPSC2_04005
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Entry
PPSC2_04005 CDS
T01335
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00470
D-Amino acid metabolism
ppm00550
Peptidoglycan biosynthesis
ppm01100
Metabolic pathways
ppm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPSC2_04005 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPSC2_04005 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PPSC2_04005 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppm01011
]
PPSC2_04005 (ddl)
Enzymes [BR:
ppm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PPSC2_04005 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppm01011
]
Precursor biosynthesis
Amino acid ligase
PPSC2_04005 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ADO54791
UniProt:
E3ECL9
LinkDB
All DBs
Position
900408..901496
Genome browser
AA seq
362 aa
AA seq
DB search
MANQKLTVGLVYGGKSGEHEVSLQTAYAVMNAFNYEKYEIIPFYITKAGDWRRGTLLNAP
LTTVEQLKLEHAEGGTKAALDTLFGKLYGEQTLDVLFPLLHGTFGEDGTIQGLFEMADMP
YVGAGVLASAAGMDKGVMKKLFEHAGLPQVKYCYFNSTQWAQTGHDLVRNIETELGYPCF
VKPANLGSSVGISKASNREELEKAVDLALQFDLKVIVEEYVDAREIEVSVLGNDEPIASV
PGEIVSSSDYYDYAAKYTDGQSEMLIPAPLDEEVADRIRESALQAFRALEGCGISRADFF
VRRSDGHILINEVNTMPGFTPFSMYPLLWRETGVSYVNLLDRMIALALERYERRSALHYE
NS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaaaaattaaccgtagggctggtgtacggtggtaaatcgggcgaacatgag
gtatcgctgcaaacggcgtatgcggtaatgaacgcttttaactatgagaaatacgagatt
attcctttttatattacgaaggctggcgattggcgtagagggacgctgttaaatgcgcct
ctgactactgtagagcaattgaagctggagcatgctgagggcggcaccaaggcggcatta
gatacgttgttcggcaagctgtatggagagcagacactggatgtactgtttccgctgctg
cacggcacctttggcgaggacggaacgattcagggtctgttcgaaatggcggatatgccc
tatgtcggggcaggagtgctggcttcggcagcaggtatggataaaggcgtcatgaagaag
ctgtttgagcatgcaggattgccgcaagtgaaatactgctattttaatagtacacagtgg
gcacaaaccggtcatgacttggtgcgtaacattgaaactgagctaggttatccttgcttt
gtcaaaccagccaatctgggatcaagtgtcggtatttccaaagcgagtaaccgagaagaa
ctggaaaaggctgtagatctggctttgcaatttgatctgaaggtgatcgtggaagagtac
gtcgatgcccgtgagattgaggtcagcgtacttggtaatgatgagccgattgcctcggta
ccgggtgaaattgtgtcgtcgagtgattactacgactatgctgccaaatataccgatggt
caatcggaaatgctcattccggcaccactggacgaggaagtggcagatcgtatccgtgaa
tccgcattgcaagctttccgcgctctggaaggttgcgggatttcccgtgcagatttcttc
gtcagacgctcagatggacatatccttattaatgaagtgaatacgatgcctggctttaca
ccgttcagcatgtatccattgttgtggagagaaaccggcgtatcctatgtaaatctactg
gatcgcatgattgctcttgcactggagcgttatgagcgccggtcggcacttcactatgag
aactcataa
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