Paenibacillus polymyxa SC2: PPSC2_11035
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Entry
PPSC2_11035 CDS
T01335
Symbol
yrhB
Name
(GenBank) cystathionine gamma-synthase
KO
K17217
cystathionine gamma-lyase / homocysteine desulfhydrase [EC:
4.4.1.1
4.4.1.2
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00260
Glycine, serine and threonine metabolism
ppm00270
Cysteine and methionine metabolism
ppm00920
Sulfur metabolism
ppm01100
Metabolic pathways
ppm01110
Biosynthesis of secondary metabolites
ppm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
PPSC2_11035 (yrhB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PPSC2_11035 (yrhB)
00270 Cysteine and methionine metabolism
PPSC2_11035 (yrhB)
Enzymes [BR:
ppm01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
PPSC2_11035 (yrhB)
4.4.1.2 homocysteine desulfhydrase
PPSC2_11035 (yrhB)
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Met_gamma_lyase
GDC-P
Urease_gamma
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADO56320
UniProt:
E3EHQ8
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All DBs
Position
2416078..2417208
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AA seq
376 aa
AA seq
DB search
MKRKTKLIHGGLPTDPHTGAVNVPIYQVSTYEQEEIGVHKGYEYSRTGNPTRFALEELIK
ELEEGTRGFAFGSGMAAIHAVFSLFKAGDHILLTDDVYGGTYRIVSKVLSRIGIESTFVD
TTDLEAISKAIRPNTKALYVETPTNPLLKVTDIRAVSELVKKHELLLIVDNTFATPYWQT
PITLGADIVVHSATKYLGGHSDVVAGLAVVNSEELGEQLHFLQNAIGGILGPQDSWLLIR
GIKTLGLRMEAIEKNAKEIAAFLEKHPKVSKVYYPGLESHAQHELSKIQAEGFGGIISFD
VGSDANAVALLKKVKYFTLAESLGAVESLISVPARMTHASIPAERRAELGITEGLVRISV
GIEDLEDLIEDLQSAL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaaacaaaactgattcacggtggactccctaccgatcctcatactggcgcg
gttaacgttcctatttatcaggtaagcacttatgagcaagaggaaatcggcgttcataag
ggatacgagtattcgcgtacaggcaacccgactcggtttgcactggaagagctgatcaag
gaactggaggaaggcacacgcggttttgctttcggttcgggtatggcagcgattcatgca
gtgttttccttgtttaaagcaggggatcatattttgctgaccgatgatgtatacgggggc
acttatcgtattgtaagcaaagtgcttagtcggatcgggattgagtccacatttgtggat
acaactgatctggaggctatttctaaagcaatccgtccgaatacgaaggcattgtatgtc
gaaacaccaacaaatccgctgttgaaagttactgatatccgcgcagtttcagaactggtg
aaaaagcatgagcttttgttgattgtggacaatacatttgctaccccttactggcagacg
ccaattacactcggggctgatatcgtcgtacactccgcaaccaaatatttgggtggacac
agcgatgttgtagccggtctggctgtagtcaacagtgaagagctgggcgagcagcttcat
tttctgcaaaacgccattggcggtattctcggtccgcaggattcatggttattgattcgt
ggtatcaaaaccttgggtctgcgtatggaagcaattgagaaaaatgcaaaggaaattgca
gcctttttggaaaagcatccgaaggttagtaaggtgtactaccctgggctggaaagccat
gcacagcacgagctgtccaaaattcaagctgaaggctttggcggcatcatttcctttgat
gtaggtagcgatgctaacgcggttgccctcctgaaaaaagtaaagtattttacattggct
gagagcttgggagcggttgaaagtctgattagcgttccagcacgtatgacgcacgcctcc
attccggcagaacgccgtgcagagctaggtattacagaaggcttggtacggatttcggtt
gggatcgaagatctggaggatttgatcgaagacttgcagtcagcattgtaa
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