Paludibacter propionicigenes: Palpr_0535
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Entry
Palpr_0535 CDS
T01362
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn00300
Lysine biosynthesis
ppn00470
D-Amino acid metabolism
ppn00550
Peptidoglycan biosynthesis
ppn01100
Metabolic pathways
ppn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Palpr_0535
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Palpr_0535
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Palpr_0535
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Palpr_0535
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppn01011
]
Palpr_0535
Enzymes [BR:
ppn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Palpr_0535
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Palpr_0535
Peptidoglycan biosynthesis and degradation proteins [BR:
ppn01011
]
Precursor biosynthesis
Amino acid ligase
Palpr_0535
Racemase
Palpr_0535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
ADQ78694
UniProt:
E4T1V0
LinkDB
All DBs
Position
651711..654170
Genome browser
AA seq
819 aa
AA seq
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MKLNKIAQIVGANDSNVPSVEINWLLTDSRSLSFPVESLFFAIHTARNNGHNYIAELYQQ
NLRYFVVSEMHPEFEKMTDAVFLKVEDSLKALQALAVAHRNAFDIPVIGITGSNGKTVVK
EWLYQLLHTDYVITRSPRSYNSQIGVPLSVWALSESTQLGIFEAGISEPHEMKRLQPIIR
PTIGIFTNLGDAHQENFSGLKQKCEEKLQLFDQSEVLVYCSDNKLVEISIAQSAFKGVFF
SWGKSDKATVQIVQKEKTVSSTKVVLKYNAVESSVTIPFTDDASIENALQCVAVMLYLGL
KTAEIAKRILLLEAVAMRLEVKEGVRDCLIINDSYNSDLNSLSIALDFLNQQATAKKLSK
TLILSDILQSGQTSDELYKTVSGLVHNKNVQRIIGIGSEISKHADIFELVDKTFFEQTED
FLKSPILRELKNEIILLKGSRTYHFEDISEKLELVTHETTLEVNLNALIDNLNYFRAKLR
PETKIMCMVKAFAYGSGAVEVARTLQHHRCDYLAVAVADEGAELRREGIRIPIVVMNPEK
GSFGMIFDNKLEPEIYSFRLLDAFIASAEKLGLTDYPIHIKIDSGMHRLGFEPKNMEELL
TRLKNQNQVKVRSVFSHLSGSDEAKFDSFTKQQIDTFTDCADQLSGAFSHNIMRHILNSA
GIERFSEYQFDMVRLGIGHYGISSLPDVKLKQVCALKTIILQIKTVKAGETVGYSRKGIV
NEDKRIAIIPIGYADGFDRKLGNGGGEVLVNGKRAKVIGNVCMDLVMIDVTNVEANEGDS
VEIFGDNLTISEVAGWLKTIPYEVLTSVSRRVKRVYFQE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaataaaatagctcagattgttggagcgaatgattcaaacgttccatctgtc
gaaataaattggttacttaccgatagccgttcattatcttttccggtagaaagtttattt
tttgccattcatacggctaggaataacggtcacaattatattgctgagctttaccaacag
aaccttcgttactttgtggtgagtgaaatgcatcctgagtttgagaaaatgaccgatgct
gttttcttgaaagtggaggatagtttgaaagctttgcaagctttggcagttgctcaccgc
aatgcatttgacattccggttattggtataaccggtagtaatggcaaaacagttgtaaaa
gaatggctctaccaacttttacacaccgactatgtgattacacgctcgcccagaagttat
aactcgcaaattggcgttccgctttcggtttgggctttgagcgaaagtactcaattgggt
atttttgaagcgggaatctccgaaccgcacgagatgaaacgtctccaaccgattattcga
ccgacaataggcatttttaccaatttaggcgatgcgcatcaggaaaattttagtggactc
aagcagaaatgcgaagaaaagctccaactttttgatcaatcggaagtgcttgtatattgc
agcgacaataagcttgtagaaatatctatagctcaatccgctttcaaaggcgtattcttt
tcctggggaaagtctgataaagctaccgttcagatagtacaaaaagaaaaaacggtgtcg
agcactaaagtcgtgttgaaatacaatgctgtagagtcgtctgtaaccatccctttcaca
gacgatgcttctatcgaaaatgcgctacaatgtgtggctgtgatgttgtatttaggcttg
aaaaccgctgaaatagctaaacgaattttactgctcgaagctgtagctatgcggcttgaa
gtaaaagaaggtgtgcgtgactgtctgattataaacgatagttataattcggatttgaac
tcgttaagcattgcacttgattttctgaaccagcaagctactgctaaaaaactatcaaaa
acattgattctgtcggatattctgcaaagcggtcaaacatcagatgagctttataaaact
gtttccgggctggtacacaacaaaaatgtacaacgtattataggtatcggttctgaaata
tccaaacatgccgacatattcgagttggttgataaaactttctttgaacaaaccgaagat
tttctgaaatcaccaattcttcgcgagttgaaaaatgagattattctactcaagggttcc
agaacataccatttcgaagacatttctgagaagctcgaactggtaactcacgaaactacg
ctggaagtaaacctgaatgcgctgatagataatttgaattatttccgcgctaaacttcgc
cccgaaacgaaaataatgtgcatggtaaaagcatttgcctacggaagcggagctgttgaa
gtggcacgtacactgcaacatcatcgatgcgattacctggcagtggcagtggctgatgaa
ggtgccgaactgcgccgtgagggaattagaatacctatcgtggtgatgaatcctgaaaaa
ggaagtttcggtatgatattcgacaacaagcttgagcctgaaatatacagctttaggcta
cttgatgcttttattgcttcggcagaaaagcttggtttgactgattatccgattcatatt
aagattgatagcggtatgcatcgcctcggcttcgaacctaaaaatatggaggaattactg
actcgcctaaagaatcaaaatcaggttaaggttcgttctgtgttttctcatttatccgga
tctgacgaagcaaaatttgactctttcacaaaacagcaaatagatactttcaccgattgt
gctgaccagctatcaggtgctttctcgcataatattatgcgtcacattctcaattcagcc
ggtatagaacgattttccgaataccagtttgatatggttcgattgggaataggacattac
ggcataagctcccttcccgatgtaaaacttaagcaggtttgtgctctgaaaaccattatt
ttgcagattaaaaccgtgaaagctggagaaacagtgggttatagccggaaaggtattgtg
aacgaagataaacgaatcgccattattccgataggttatgccgatggatttgaccgtaag
ctgggcaacggaggaggtgaagtgcttgtaaatggaaaacgtgcaaaggtaataggtaat
gtttgcatggatttggttatgattgatgtaacaaatgtagaagcaaatgagggtgattcg
gtcgagatttttggggataatctgactatttctgaagtggccggttggctgaaaaccatt
ccttacgaagtgcttacaagtgtttcgcggagagtaaagagagtttattttcaagaataa
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