Pandoraea pnomenusa DSM 16536: LV28_11440
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Entry
LV28_11440 CDS
T03411
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00470
D-Amino acid metabolism
ppnm00550
Peptidoglycan biosynthesis
ppnm01100
Metabolic pathways
ppnm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LV28_11440
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LV28_11440
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LV28_11440
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppnm01011
]
LV28_11440
Enzymes [BR:
ppnm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LV28_11440
Peptidoglycan biosynthesis and degradation proteins [BR:
ppnm01011
]
Precursor biosynthesis
Amino acid ligase
LV28_11440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
ATP-grasp_4
TTL
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AIU27064
UniProt:
A0A378YLB7
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All DBs
Position
658653..659636
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AA seq
327 aa
AA seq
DB search
MSAFDPKRFGKVGVLMGGRSAERQISLISGKGVLEALRSKGVDAHGFDTGMNDLAALAAQ
KFDRVFIALHGRYGEDGTLQGALEHLGIPYTGSGVLASALAMDKEMTKRVWINEGLPTPR
FKMLDADSDFDAVARDLGLPLIVKPSREGSTIGLTKVTEASQLKAAYEKAAALDPDVLAE
EFIDGDELTVPVLGVGTKGAAAARALPVIRIVAPDANYDYQNKYFKDDTRYECPPPLSVS
LQEEVQRLVLRAYLVLGCRGWARADVMLRKRDNKPYLLEINTSPGMTGHSLVPISARAAG
LSYEDLVVEILATATLDLHPNAQWKPE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcattcgatccgaaacgtttcggcaaggttggcgtcctgatgggcgggcgctct
gccgagcgtcagatctcgctgatttcgggcaaaggcgtactcgaggcgctgcgcagcaag
ggcgtggacgcccacggtttcgataccggcatgaacgatctggcggcgctggccgcgcag
aagttcgaccgcgtgttcattgcgctgcatgggcgctacggcgaggacggcacactgcag
ggtgcgctcgagcatctcggcattccctacaccggcagtggcgtgcttgcctcggcgctg
gcgatggacaaggaaatgaccaagcgcgtgtggatcaacgaaggcctgcccacgccgcgc
ttcaagatgctcgacgccgacagcgacttcgacgccgtggcgcgcgatctcggcctgccg
ctgatcgtcaagccgtcgcgcgaaggctcgaccatcggcctcacgaaggtcacggaagcg
tcgcagctcaaggcggcctacgagaaggctgccgcgctcgatcccgacgtgctcgccgag
gagttcatcgatggcgacgagctgaccgtgccggtgttgggcgtgggcacgaagggcgcg
gccgccgcgcgcgcgctgccggtgatccgcatcgtggcgccggacgcgaactacgactat
cagaacaagtacttcaaggacgacacgcgctacgagtgcccgccgccgttgtcggtgtcg
ttgcaggaggaagtgcagcgcctcgtgttgcgcgcctacctggtgctgggatgccggggc
tgggcgcgagccgacgtgatgctgcgcaagcgcgacaacaagccgtacctgctggaaatc
aatacgtcgccgggcatgaccggtcactcgctggtgccgatctcggcacgtgcggcgggc
ctgtcgtatgaagacctggtcgttgaaatcctggcaaccgcgacgctcgatctgcatccg
aacgcgcagtggaagccagagtga
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