Pandoraea pnomenusa DSM 16536: LV28_20395
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Entry
LV28_20395 CDS
T03411
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00030
Pentose phosphate pathway
ppnm01100
Metabolic pathways
ppnm01120
Microbial metabolism in diverse environments
ppnm01200
Carbon metabolism
Module
ppnm_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
LV28_20395
Enzymes [BR:
ppnm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
LV28_20395
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Ortholog
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GFIT
Motif
Pfam:
ILVD_EDD
Motif
Other DBs
NCBI-ProteinID:
AIU28608
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Position
4135333..4137159
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AA seq
608 aa
AA seq
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MSLHPVVKRVTERLIERSRPSRQAYLEGVARAAQGQPGRERIGCANLAHALAAAPADDRL
RIRSERTPNIGIVTAYNDMLSAHAPFAEFPDIIKSAARSHGASAQVAGGVPAMCDGVTQG
YAGMELSLFSRDVIAMASVVALSHQMFDAAMFLGVCDKIVPGLVIAAQAFGHLPAVFSPA
GPMPSGLPNDEKSRIRQEYAAGRVTRAALLDAELAAYHAEGTCTFYGTANSNQMLMEFMG
LHLPGASFVNPHTPLRHALTQAATARAVALAKSGITTSQILDERAFVNGVVGLLATGGST
NHTLHLVAMAHAGGILLDWQDFAELSDVTPLLAHIYPSGKADVNQFQAAGGLNFLIRELL
DAGFLHNDVTTVMGHGLRAYTQEACLRDDVLCWQDAPAESLDENIVRPASRPFAPEGGLR
MLAGNLGRAVIKSSAVKPEHQKVRAPARVFSDQESAQAAFKAGELTRDVVVVVRFQGPRA
NGMPELHKLMPMLGLLQDEGHHVALVTDGRMSGASGKVPAAIHLSPEAEQGGMLARVQDG
DIITIDCEKNLLHCEIDDAALAARRPASPPQRPFDPWRNVFSLFRRNVGAAPHGACVLFD
DAEYPKDS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgctgcatccggtggtcaagcgcgtgacagagcgcctgatcgagcgtagccggccg
tcccgtcaggcgtatctggagggcgtggcccgcgccgcacagggacagcccggacgggag
aggatcggatgcgccaacctcgcgcatgcattggcggccgcgcccgccgacgaccgtctc
aggatccgctccgaacgcacccccaacatcggcatcgtcaccgcatacaacgatatgctt
tcggcgcacgcgccattcgccgagttccccgacatcatcaagtcggcggcgcgctcgcat
ggcgcaagcgcccaggtggccggcggcgtgcccgccatgtgcgacggcgtgacgcaaggc
tatgccggcatggaactgtcgctcttctcccgtgacgtgatcgccatggcgtcggtggtc
gcgctctcgcaccagatgttcgacgcggccatgttcctcggcgtatgcgacaagatcgtg
ccgggtctcgtgattgccgcacaggcgttcggccacctgcccgccgtgttcagtccggcc
ggccccatgccctcgggactgcccaacgacgagaagtcgcgcatccgccaggagtacgcc
gccgggcgcgtcacgcgcgccgcgctgctcgacgccgaactcgcggcctatcacgccgaa
ggcacctgcacgttctacggcacggcgaacagcaatcagatgctcatggagttcatgggc
ctgcatctgccgggcgcgtcgttcgtcaacccccatacgccgctgcgccacgcgctcacg
caagccgccacggcgcgcgcggtagccctcgcgaaatcgggcatcaccacgtcgcagatc
ctcgacgagcgcgctttcgtcaacggcgtggtcggcctgctcgcgaccggcggctcgacc
aaccacacgctgcacctggtcgccatggcgcacgcgggcggcatcctgctcgactggcag
gacttcgcggaactgtccgacgtcacgccgctactcgctcacatctacccgagcggcaaa
gccgacgtgaaccagttccaggcggcgggtggtctgaatttcctcattcgtgaactgctt
gacgccggcttcctgcacaacgacgtgaccacggtcatggggcacgggctgcgcgcgtac
acgcaggaagcctgcctgcgcgatgacgtgctgtgctggcaggacgctcccgccgaatcg
ctcgacgagaacatcgtgcgtccggcctcgcgaccgtttgcgcccgagggcggcctgcgc
atgctcgccggcaatctcggacgcgccgtcatcaagtcgtcggccgtcaaacccgagcac
cagaaggtgcgcgcacccgcgcgcgtgttctcggatcaggagtccgcccaggccgcgttc
aaggcgggcgaactgacgcgcgacgtggtcgtggtggtgcgcttccaggggccccgcgcg
aacggcatgccggagctgcacaagctcatgccgatgctcggcctgctgcaggacgaaggt
caccatgtggcgctcgtgaccgacggccggatgtcgggcgcgtccggcaaggtgcccgcc
gccattcatctgtcgcccgaagccgagcagggcggcatgctcgcgcgcgtgcaggatggc
gacatcatcaccatcgactgcgaaaagaacctccttcattgcgaaatcgacgacgccgca
ctcgccgcacgccgtccggcgtcgccgccgcaacgcccgttcgatccctggcgcaacgtc
ttctcgctgttccggcgcaatgtcggcgccgcgccgcacggcgcctgcgtgctcttcgac
gacgccgagtatccgaaggacagttga
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