Pandoraea pnomenusa RB38: DA70_03095
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Entry
DA70_03095 CDS
T03067
Name
(GenBank) hypothetical protein
KO
K07347
outer membrane usher protein
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DA70_03095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppno02000
]
DA70_03095
02044 Secretion system [BR:
ppno02044
]
DA70_03095
02035 Bacterial motility proteins [BR:
ppno02035
]
DA70_03095
Transporters [BR:
ppno02000
]
Other transporters
Pores ion channels [TC:
1
]
DA70_03095
Secretion system [BR:
ppno02044
]
Chaperone-usher system
Type 1 pilus assembly protein
DA70_03095
Bacterial motility proteins [BR:
ppno02035
]
Pilus system
Fimbrial proteins
DA70_03095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
DUF5429
Motif
Other DBs
NCBI-ProteinID:
AHN73551
LinkDB
All DBs
Position
2902073..2904325
Genome browser
AA seq
750 aa
AA seq
DB search
MLAVVVNGEPTGLIAPFVRRRGRWFVRAGDLRALGLNSPELSTQDVTEVALDALRGIRYA
YDAPTQTLELTVDDKWLAPYTLGAPAPAPIRATAGTGVVVNYDGYVQRDRFTRASVWSEF
RGFWPGGTLRQTGVTEHSHWRRGYRRYDTWWQHDDPARLASWTAGDLITGSLSWTRSLRI
AGMQWRRNFSLRPDLVTFPVPALRGSAVVPSSVDLYLDGVRRMGARVPPGPFVIQEAPGL
TGDLQASVVTRDALGREQITTVPLYIDPRLLARGLSSFSVEAGWPREAYGIRSFSYRGDP
VASIAARYGASDTVTVEAQLQAGRRLALGGVGALAALGHAGVAGVSVAASSGRGAGAQWS
AGYQYLSRYLSVDARMVRAIGHYRDIASLDGTPVPRASDRVSLSLPLGRGSTASLAWFAQ
RMRRQPATRVLSASLTLPAGTRGMISLGGFRDFARRGVHGVFAMLSVLLGGNALGSASMT
SQGGGTQTWAGASRTPDYQGGWGWQVLAGRAFSRHTAQGELQYLGRHGQISALVQRVGRE
TGTGIGVTGALVVMDHGVHATRHAYDAFALVSADGQAGVPVLRESVRVGRTDARGYYLVP
DLSGYEATRIGIDPMHLPADLEVTTTERRIAPQSGSGVLVRFPVRRYRAALVTLVGSTGQ
PLRPGTAVRHVQSGFVTIVGYDGEVFVDDLGMRNTLEAHDGSQRCRASFEWSESPNGNIA
RIGPLECVAFGTLAERRPGRPRAPTIEAPS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgcggtagtcgtcaacggcgagcccaccgggctgatcgcgcccttcgtgcgccga
cggggacgctggttcgtgcgcgcgggcgaccttcgggcgttgggactgaactcgccggag
ctatcgacgcaggacgtgaccgaagtcgcgctcgacgccctgcgcggcattcgttacgcc
tacgatgcgcccacgcagacactcgagctgacggtggacgacaagtggctcgccccgtac
acgctgggcgctccggcaccggcgccgatccgcgcgacggcgggcaccggggtcgtcgtc
aattacgacggctacgtgcagcgcgaccggttcacgcgtgcctccgtatggagcgagttt
cgcggcttctggccgggcggcacgctgcggcagaccggcgtgaccgagcattcgcactgg
cggcgcggctaccgccgatacgacacctggtggcagcatgacgatccggcgcgtctggcg
agctggacggccggcgatctgatcacgggctcgctgtcatggacgcgatcgctgcgcatc
gcggggatgcaatggcggcgaaatttcagtctgcgaccggatctcgtcacgtttcccgta
ccggcgttgcgcggcagcgccgtcgtgccatcgtcggtggacctgtatctggacggcgtg
cgacgcatgggggcacgcgtaccgccgggtcctttcgtcattcaggaggcccccggccta
accggcgacctccaggcaagcgtggtcacccgagatgcgcttgggcgtgagcaaatcacc
acagtgccgctatacatcgatccgcgtttgctcgcccgcggactttcgagcttttccgtg
gaagccggctggccgcgcgaggcttacggcatccgctcgttctcgtatcggggcgatccc
gtcgcatcgatcgccgcgcgctacggcgcgagcgacacggtgaccgtggaggcccagtta
caggcaggccgccgtctcgcgctgggtggcgtgggcgcgctcgccgcgctgggacacgcc
ggggtcgccggcgtgtcggtcgcggcgtccagcgggcgcggtgccggcgcgcaatggagt
gcgggctatcagtatctgtctcgatacctgagcgtcgacgcccgcatggttcgcgccatc
gggcactatcgcgacatcgcgtcgctcgacggcacgcccgtgccgcgtgcaagcgaccgc
gtgagcctctcgctcccgcttggtcgcggcagcaccgcctcgctcgcctggttcgcccag
cgcatgcggcgccagccggccacgcgcgtgctgtcggcgagcctgacgctcccagcgggc
acgcgcggcatgatatcgctgggcggctttcgcgacttcgcacgtcgcggggtgcacggg
gtgttcgccatgctcagcgtgctgctcggcggcaatgcattgggcagcgcctcgatgacc
agccagggtggcggcacgcaaacctgggcaggcgcgagccgaacgcccgactatcaaggc
ggctgggggtggcaggtgctcgcggggcgggccttctcgcgccacacggcacagggcgaa
ctgcaatacctcggccggcacggtcagatatccgctctggtgcaaagggtgggacgcgag
acaggcaccggcattggcgtgaccggcgcgctcgtggtcatggaccacggtgtgcatgcg
acgcgacacgcttacgacgccttcgcactcgtgagcgccgacggtcaggcgggcgtaccg
gtgttgcgcgaatcggtgcgcgtcggtcgaacggacgcgcgcggctactatctcgtgccg
gacctgagcggctacgaagccacgcggatcggcatcgaccccatgcacctgcccgccgac
ctggaagtcacgacgacagaacgccgcatcgcgccgcaatcgggcagcggcgtgctggtg
cgctttcccgtgcggcgatatcgcgccgcactggtcaccctcgtcgggtcgacgggacag
cccctgcgccccggcaccgccgtgcgtcatgtacaaagcggattcgtcacgatcgtgggc
tacgacggcgaagtcttcgtcgacgatctcggcatgcgcaatacgctcgaggcgcatgac
ggttcacagcgatgccgcgcgtcgttcgaatggtccgagtcgcccaacggcaacattgcg
cgcatcggccccctcgagtgcgtggcgttcggcacgcttgccgagcggcgcccgggacgt
ccccgcgcgcccaccatagaggcgccgtcgtga
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