Pandoraea pnomenusa RB38: DA70_09175
Help
Entry
DA70_09175 CDS
T03067
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA70_09175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppno02000
]
DA70_09175
Transporters [BR:
ppno02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DA70_09175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Ependymin
Motif
Other DBs
NCBI-ProteinID:
AHN74621
UniProt:
A0A378YW82
LinkDB
All DBs
Position
1549963..1551030
Genome browser
AA seq
355 aa
AA seq
DB search
MKNETSNPSAGRRSVIKLLGAAAGAAVSAPFIHTARAADPLFVNTWGGDWEKAAAAHLFE
PFTRDTGIPIRTVSPVSYAKLAAQARTGVYEFDVTTLGGGELIRAVEAGLVEKIDTSIID
MKQLPPGQAYMSGIATHAFATVIASRKDKFPNGGPQNWAEFWDTQRFPGPRSLQRYAARV
VPLALLADGVPAGKLYPMDLDRAFKSFDRIKKDVRVWWTQGQQSQQLLRDGEVNAVAIWH
GRALSLIRQNAPVELVWNQGEIDRAYWVVSKGTPRAKQAWQFIASALKAERLAKFCMQAD
YSPVDQRVFQFIPDAQAKGMPTYPANYRLTFEQDLARMGPQLNELSRRFDQFVVR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaacgaaacatcgaatccgtcggcgggtcgccgctccgtcatcaagcttctgggt
gcggcagcgggcgctgccgtctccgcgcccttcattcacacggcgcgcgccgccgacccg
ttgttcgtcaatacttgggggggcgactgggagaaggccgccgcagcgcatctgttcgag
cccttcacccgggataccggcatccccatccgcacggtctcgccggtctcgtacgccaag
cttgccgcacaggcgcgcacgggggtgtatgaattcgacgtcacgacgcttggcggcggc
gagctgattcgcgccgtcgaagccggcctcgtggaaaagatcgacacgagcatcatcgac
atgaagcaactgccgccggggcaggcttacatgagtgggatcgctacgcatgcgttcgcg
accgtcatcgcttcgcgcaaggacaagttccccaacggcggaccgcagaactgggccgag
ttctgggatacgcagcgatttcccggaccgaggagcctgcaacgctacgcggcacgtgtc
gtgccgctcgcgctgctcgccgacggcgtgccggcgggcaagctctacccgatggatctc
gatcgcgcgttcaagtcgttcgatcgcatcaagaaagacgtgcgtgtctggtggacgcag
ggacaacagtcgcaacaactgctgcgcgacggcgaggtcaacgccgtggcaatctggcat
ggccgagcgttgtcgctgattcgtcagaacgccccggtggagctggtgtggaaccagggt
gagatcgaccgggcgtactgggtcgtgtccaaaggcacgccgcgggccaagcaggcctgg
cagttcatcgcatcggcgctcaaggccgaacgactggccaagttctgcatgcaagccgat
tacagcccggtcgatcagcgcgtgttccagttcatccccgacgcgcaagccaagggcatg
ccgacctatccggcgaattatcggctgaccttcgagcaggatctggccaggatgggtccg
caactcaacgagctgtcgcgtcgcttcgatcagttcgtcgtccggtaa
DBGET
integrated database retrieval system
