Pandoraea pnomenusa RB38: DA70_21205
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Entry
DA70_21205 CDS
T03067
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00061
Fatty acid biosynthesis
ppno00071
Fatty acid degradation
ppno01100
Metabolic pathways
ppno01212
Fatty acid metabolism
ppno02024
Quorum sensing
Module
ppno_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DA70_21205
00071 Fatty acid degradation
DA70_21205
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DA70_21205
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppno01004
]
DA70_21205
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppno04147
]
DA70_21205
Enzymes [BR:
ppno01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DA70_21205
Lipid biosynthesis proteins [BR:
ppno01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
DA70_21205
Exosome [BR:
ppno04147
]
Exosomal proteins
Exosomal proteins of breast milk
DA70_21205
Exosomal proteins of breast cancer cells
DA70_21205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AHN76705
LinkDB
All DBs
Position
4303801..4305384
Genome browser
AA seq
527 aa
AA seq
DB search
MSAPTDTSDAPAMPDSDTSVAALLATLPARIDALPARIAAHAPARIALIDDFGRMTYGEL
ANAVAASADRLRAHGVRGGDRVMIVGENGIAYVVLLLAAASLDAWPLLCNARLSSVELSV
IRAHARPRCAIYAIDASPDAAAHARADAAKVAWTELALGAVAVSDIDAESAAEPVSADPA
AQCAALIYTTGTTGTPKGVRLSHRNLMFIAAVSSTLRRVSADDVAYGVLPISHVYGLTSV
CLGTLYAGGTLRLAARFSPEAVLDSLAHDGLTILQGVPAMHARLMAHVATQGVPLVAPRL
RFVYSGGSPLDAALKARVEAFYGLPIHNGYGLTESSPTVSQTLLDAPRDDCAVGPVIPGV
AVRIVDRDGRDAPDGEVGELWVRGPNVMLGYYRAPELTAAAVSADGWLRTGDLGRRAADG
ALFLAGRARELIIHSGFNVYPIEVEQALASHPDVLQAAVLGREHEGNEQVIAFVEARPGH
VIDEPGLAAWAAQRLAPYKRPAQIRVLDALPAASTGKVLKHRLKALL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccctaccgacacctcagacgcccccgccatgccggactcggacacgtcagtt
gccgcgttgctcgcgacgcttcccgcccgcatcgacgccctgcccgcgcgcattgccgcg
cacgcgcccgcacgcatcgcgctgatcgacgacttcggccggatgacctacggcgaactc
gcgaacgccgtggccgcgagtgcggaccgcctgcgcgcgcatggcgtgcgtggcggcgat
cgcgtcatgatcgttggcgagaacggcatcgcgtatgtggtgctgcttctcgccgcggcg
tcgctcgacgcatggcccctgctgtgcaacgcccgcctgtcgtcggtcgagctgagcgtg
atccgcgcgcatgcacgcccgcgctgcgccatttacgccatcgacgcctcgcccgacgcg
gcggcccacgcgcgtgccgacgccgcgaaggtcgcatggaccgagctcgcgctgggcgcc
gtcgcggtatccgacatcgatgccgagagtgccgccgagcccgtctcggccgatccggct
gcgcaatgcgcggcgctcatctatacgacgggcacgacaggcacgccgaagggcgtgcgc
ctgtcgcaccgcaacctgatgttcatcgcggccgtgtccagcacattgcggcgcgtgagc
gccgacgatgtcgcatacggcgtgctgccgatttctcacgtctacggcctcacgtcggtg
tgcctcggcacgctctacgcgggcggcacgctccgactggccgcgcgcttcagcccggag
gccgtgctcgactcgctcgcccacgacggcctgaccatcctgcaaggcgtgcctgccatg
cacgcgcgactgatggcgcacgtggcaacgcagggggtaccgctggtcgcgccgcggctt
cgtttcgtctactcgggcggctccccgctcgacgccgcgctcaaggcccgcgtcgaagcg
ttctacggcctgccgatccataacggctacgggctcaccgagagcagccccaccgtgtcg
cagacgctgctcgatgcgccgcgcgacgattgtgccgtcgggccggtcattccgggcgtg
gcggtgcgaatcgtcgatcgcgacggccgcgacgcgcccgacggcgaggtcggcgaactg
tgggtgcgcggcccgaacgtcatgctgggctactatcgcgcgcccgagctgacggccgcc
gcggtgagcgccgacggttggctacgcaccggcgacctggggcgccgcgccgccgacggc
gcgcttttcctcgccggacgcgcccgcgaactgatcattcactccggtttcaatgtctac
ccgatcgaggtcgaacaagcgctcgcgagccatccggacgtccttcaggccgccgtgctc
ggtcgcgaacacgaaggtaacgaacaggtgattgcgttcgtggaggcgcgcccgggtcat
gtcatcgatgaaccgggcctggcggcgtgggcggcgcagcgcctcgcgccgtacaagcgc
ccggcgcagattcgcgtgctcgacgccctgcccgccgcatcgaccggcaaggtgctcaag
caccggctcaaggcattgctctga
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