Paenibacillus polymyxa CR1: X809_32695
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Entry
X809_32695 CDS
T02956
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol00300
Lysine biosynthesis
ppol00550
Peptidoglycan biosynthesis
ppol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
X809_32695
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X809_32695
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppol01011
]
X809_32695
Enzymes [BR:
ppol01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
X809_32695
Peptidoglycan biosynthesis and degradation proteins [BR:
ppol01011
]
Precursor biosynthesis
Amino acid ligase
X809_32695
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AIW40774
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Position
complement(3886048..3887535)
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AA seq
495 aa
AA seq
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MQLQQLASLLAVSRVVGDGTVDCRGIGADSRRVQQRDLFLCLPGFTVDGHDYAEQAIASG
AAALVVERELDVPVPQLVVKDARHAMAVLADYMFDSPSRRMRMIGITGTNGKTTITYLIE
KIMKDAGVNTGLIGTIQMRYGGQSYPMSGTTPEAVELQRYLGNMAEQGVQCCVMEVSSHA
LEQGRVKGTDFRTAIFTNLTQDHLDYHNTMEEYRAAKGLLFSRLGNAFSRDASDSKYAVL
NADDPASSYLQAQTAAQVITYGVEKESDVQASRITIGSKGTSFHVSTFKGDTDIELRMVG
KFNVYNALAAITAALLEGISLVDIKRSLESIAGVDGRVEPVDAGQPFAVIVDYAHTPDGL
ENVLRTVKEFAVGKVWCVFGCGGDRDRTKRPLMGKIAARYSDHSFITSDNPRTEDPKVIL
KDIEQGLIDEGVPAERYELIVDRRTAIHKAVEMASPDDVVLIAGKGHETYQLIGKTVHEF
DDRIVAKEAIRGLSK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttcaacaattggcttcactgctggccgtctcccgtgtggtgggtgacggtaca
gtggattgccgaggaatcggggcggattcacgtcgagtgcaacagagggatttatttctg
tgtttgccaggttttacagtggacggacatgactatgctgagcaggcaattgcgtccggg
gcggcagctttggtcgttgaacgtgaactggatgtacctgttccgcagcttgtagttaag
gatgcacgacatgccatggctgttttggcagattatatgtttgattcaccgagccgacgc
atgcgcatgatcggaataaccggaaccaacggtaaaacaacgataacttatctgattgaa
aagatcatgaaggatgcgggggtgaacaccggactgattggtacgattcaaatgcgttac
ggtggtcagtcttacccaatgtctggcactacgcccgaagcggtggaactgcaacgttat
ctcggaaatatggcagagcagggggttcaatgctgtgtcatggaagtatcctcacatgcg
ttggagcagggccgcgtcaaaggaactgattttcgcaccgctatatttacaaacctgacg
caggaccacctggactaccacaacacaatggaggagtaccgtgctgcaaaaggactttta
ttctctaggttgggaaatgctttctcgcgggatgcatccgatagcaaatatgctgttctg
aatgcagacgatccggcttcttcctatttgcaggctcaaactgcggcccaagtgattaca
tacggcgtggaaaaggagtctgatgtgcaggcatctcgtatcactataggttccaaggga
acctcctttcatgtgtctacttttaaaggagataccgatattgagcttcgaatggtaggc
aagttcaatgtgtacaacgcactggcggccattaccgctgctttgctggaaggaatctcg
ttggtggatatcaagcgtagtctagagtctattgcaggcgtagatgggcgggtagagcct
gtagatgcgggtcagccctttgctgttattgtagattatgcccatacaccggacggattg
gaaaatgtccttcgcaccgtaaaggaatttgcggtcggtaaagtatggtgtgtatttgga
tgcggcggcgaccgagatcgtacgaaacgcccattgatggggaaaattgctgcgcgttac
agcgatcactcgtttattacttccgacaatccgcgaacagaggacccgaaagtgattttg
aaagacatcgaacaagggttgatcgacgaaggtgtacccgcagaacgatacgaattgatc
gtggatcgcagaactgcaattcataaagctgttgaaatggcaagccctgacgatgtagta
ttgattgcgggaaaaggtcatgagacttaccagttgatcggaaaaacggtgcatgaattc
gatgaccgcatcgtagccaaagaagcgataaggggtttatccaagtga
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