Paenibacillus polymyxa Sb3-1: RE92_00260
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Entry
RE92_00260 CDS
T03812
Name
(GenBank) tetracycline resistance protein
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoy02000
]
RE92_00260
01504 Antimicrobial resistance genes [BR:
ppoy01504
]
RE92_00260
Transporters [BR:
ppoy02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
RE92_00260
Antimicrobial resistance genes [BR:
ppoy01504
]
Gene variants
Tetracycline resistance genes
Transporters
RE92_00260
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
RE92_00260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Motif
Other DBs
NCBI-ProteinID:
AJE49589
LinkDB
All DBs
Position
complement(74862..76244)
Genome browser
AA seq
460 aa
AA seq
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MEKSIEKRIPKSLIWLCVLAFFSVLNETVFNVSLPDIAAQFGIKPSAANYVNTSFILSFA
VGTAVYGKISDIYGVKKLVLISMMIYSGGSLIGLLFHAWFPILLVARFIQGAGASAVPGL
IMVIVTKSIEKQHQGKAFGMIGSTVALGEGFGPIVGGWIADYVHWSYLFFLPMMTLVTLP
FFLRTLPDEPMKKGGLDVLGGLLFVLGIVSFTLFTTHYEWWYLTNSVILFIGFVLRIRRA
KEPFVEPALFKRRRFIVGVFVGGILLGTVAGFMSMIPYMMREVHQMSTSLIGGGVLFPGT
LSVILFGIVGGSLVDRQGARFVMVAGLLLLVMGLFIVSLFADRSLWIISGALVLIFGGLS
FVKTVISTIVAGSLSADESGSGMGFLNFSCFLAEGIGIAIVGGLLTQLRCNFPILPIVTD
VAAYLYSNLTLLLLAVVITGGAIFMIVFKGEEASLDINRN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcgattgagaaacgtattcctaaatctttgatttggctgtgcgtgcttgca
tttttcagcgtattgaatgagacggtgttcaacgtatcgttgcccgacattgccgctcaa
tttggaattaagccatccgctgcaaattatgttaataccagctttattctttcttttgcc
gtaggaacggccgtttacggaaaaatatcggacatttatggcgtaaaaaaactggttctc
atcagtatgatgatatatagcgggggatcgctaattggcttgctttttcatgcctggttt
ccgattttgcttgtcgcacgatttatccaaggagcgggtgcttctgccgtccccggactg
attatggtcatcgttaccaaaagtatcgaaaagcagcatcaaggaaaagcttttggaatg
attggatcgaccgttgctctgggagaaggttttggtcctatagttggaggctggatcgcg
gactatgtacattggtcctatctgttttttctgccaatgatgacgctagtcacactacct
tttttcttacggacgctgcctgacgaacctatgaaaaaaggtgggcttgatgttctggga
ggcctgctctttgttcttggaattgtttcgttcactttatttacgacacattacgagtgg
tggtatttgaccaacagtgtcattcttttcataggatttgtgctgagaattcgaagagct
aaggaacctttcgtagaaccagctttattcaagaggagaaggtttattgtcggcgtattt
gtagggggaatacttctaggtaccgttgcaggatttatgtctatgatcccttacatgatg
agagaagtacaccagatgtcgacaagccttatcggaggcggtgttctgtttccaggaacg
cttagcgtgattctttttgggatcgttggcggttctttggtcgataggcagggagctcgt
tttgtcatggttgcagggttattgcttctcgtgatggggcttttcatcgtttcacttttt
gccgatcgtagcctctggatcatttcaggagcattggttttgatttttggtgggctatcc
tttgtcaaaacggtcatctcaaccattgtggcaggctcgctaagtgctgacgaatcaggc
tcaggtatggggtttttaaatttttcctgctttttggcggaagggattggtatcgcaatt
gtaggaggactgcttacacagcttaggtgcaactttcctattctcccgatcgttactgac
gttgcagcatatttgtacagcaatttgacgttactacttctagctgtagtaattacaggc
ggtgctatttttatgatcgtatttaagggagaagaggcttccttggacattaatagaaat
taa
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