Paenibacillus polymyxa Sb3-1: RE92_12815
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Entry
RE92_12815 CDS
T03812
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00500
Starch and sucrose metabolism
ppoy01100
Metabolic pathways
ppoy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RE92_12815
Enzymes [BR:
ppoy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
RE92_12815
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_14
CBM_25
Alpha-amylase
Glyco_hydro_42
Cyc-maltodext_C
hDGE_amylase
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
AJE51857
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Position
complement(2906150..2909740)
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AA seq
1196 aa
AA seq
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MTLYRSLWKKGCMLLLSLVLSLTAFIGSPSNTASAAVADDFQASVMGPLAKINDWGSFKK
QLQTLKNNGVYAITTDVWWGYVESAGDNQFDWSYYKTYANAVKEAGLKWVPIISTHKCGG
NVGDDCNIPLPSWLSSKGSADEMQFKDESGYANSEALSPLWSGTGKQYDELYASFAENFA
GYKSIIPKIYLSGGPSGELRYPSYYPAAGWSYPGRGKFQAYTETAKNAFRTAMNDKYGSL
DKINAAWGTKLTSLSQINPPTDGDGFYTNGGYNSVYGKDFLSWYQSVLEKHLGVIGAAAH
KNFDSVFGVRIGAKISGLHWQMNNPAMPHGTEQAGGYYDYNRLIQKFKDADLDLTFTCLE
MSDNGTAPNYSLPSTLVDTVSSIANAKGVRLNGENALPTGGSGFQKIEEKITKFGYHGFT
LLRINNLVNNDGSPTGELSGFKQYIISKAKPDNNGGTGNKVTIYYKKGFNSPYIHYRPAG
GSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAFNDGNNNWDSNNTKNYSFSTGTSTY
TPGNSGNAGTITSGAPSGANPGDGGGTTNKVTVYYKKGFNSPYIHYRPAGGSWTAAPGVK
MQDAEISGYAKITVDIGSASQLEAAFNDGNNNWDSNNTKNYLFSTGTSTYTPGLNGAAGS
IRTGAPSGSAVSVVTSTYATDLNEVAGPIQTEKLSGVSLNVSTSTYTPNVNGVEVTAQTE
APSGAFTPMDLGTLSNPTSLNTDWSKQSIYFIMTDRFSNGDTSNDNYGGFNSNNNDQRKW
HGGDFQGIIDKLDYIKNMGFTAIWITPVTMQKSEYAYHGYHTYDFYAVDGHLGTMDKFQE
LVRKAHDKNIAVMLDVVVNHTGDFQPGNGFAKAPFDKADWYHHNGDITGGDYDSNNQWKI
ENGDVAGLDDLNHENPATANELKNWIKWLLNETGIDGLRLDTVKHVPKGFLKDFDQAANT
FTMGEIFHGDPAYVGDYTRYLDAALDFPMYYTIKDVFGHDQSMRKIKDRYSDDRYYRDAQ
TNGVFIDNHDVKRFLNDASGKPGANYDKWPQLKAALGFTLTSRGIPIIYQGTEQGYSGGD
DPANRENMNFNANHDLYQYIAKLNNVRNNHPALQNGSQKEKWVDDSFYSFQRSKNGDEAI
VFINNSWNSQTRTIGNFDNLSNGTRLTNQLSNDSVQINNGSITVTLAPKEVKIFTK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
ttgaccttgtatcgaagtctatggaaaaaagggtgtatgcttctattaagccttgtgctg
tctctgaccgccttcattggctcaccctctaatacggcgagcgctgcggttgcagatgat
tttcaagcttccgttatgggaccgctggcgaaaatcaatgactggggttcctttaaaaag
cagctacaaacgttgaaaaacaatggcgtatatgccatcactaccgacgtctggtggggc
tatgtggagagcgcaggagataaccagttcgattggagttactacaaaacctatgcaaat
gccgtgaaagaagcgggactgaagtgggttcctatcatctcaacgcataagtgtggagga
aatgtaggagatgactgcaacatcccactgccaagctggctgtcgagcaagggcagtgca
gatgaaatgcagttcaaggacgaaagcggctatgccaatagtgaagccctttccccattg
tggagcggaaccggtaaacaatatgatgagctgtatgcctcattcgctgaaaactttgcc
gggtataaaagtatcattcccaaaatttatttgagcggcggtccttccggggaattgcgc
tatccgtcctactatccagcagcaggatggagctacccgggacgaggcaagttccaagct
tatactgaaacagccaaaaatgcattccgcacagctatgaatgacaagtacggatcattg
gacaagattaatgctgcttggggcaccaagcttaccagccttagccaaatcaatccaccg
actgatggggatggattttacacgaacggcgggtataactccgtgtatggaaaggatttt
ctgtcgtggtaccaaagtgtgcttgagaagcatctaggtgtcatcggagcagctgcccac
aaaaacttcgattctgtgtttggtgtccggatcggggccaaaatttccggtctgcactgg
caaatgaacaatcctgccatgccgcacggcacagaacaagcgggtggatattatgattac
aaccgtctcattcagaagttcaaggatgccgatctagacttgacatttacttgcctggag
atgagtgacaatggcacagcaccgaattattcgttgccgtctaccctggttgataccgtc
tcctccatcgcgaatgccaagggtgttcgcctgaatggtgaaaatgcactcccgacaggc
ggcagcggcttccaaaaaatcgaggagaaaatcacgaagttcggttatcacgggtttacg
ttattgcgcatcaacaatctcgtcaacaatgacggctcaccaaccggtgagttgagtgga
ttcaaacaatatatcatcagcaaagccaagcctgacaacaatggcggtacaggcaacaaa
gtaacgatatactataaaaaaggcttcaactcgccttacattcactaccgtccggctggt
ggtagctggactgctgcacctggtgtgaaaatgcaggatgccgaaattagcggctatgct
aaaattaccgtcgatatcggttctgcctcccaattggaagccgcttttaacgacggcaat
aacaactgggacagcaacaacaccaaaaactactccttcagcacgggcacttctacgtac
acgcccggtaatagtggcaatgcaggaacgatcacttcaggcgctccatcgggtgcgaat
cccggggatggcggcggtacaactaacaaagtaacggtatactacaaaaaaggcttcaac
tcaccttacattcactaccgtccggctggtggtagctggactgctgcacctggtgtgaaa
atgcaggatgccgaaattagcggctatgctaaaattaccgtcgatatcggttctgcctcc
caattggaagctgcttttaatgacggcaataacaactgggacagcaacaatactaaaaac
taccttttcagcactggaacttctacctacacacccggcttgaatggagctgcaggatct
atccgaacgggggcaccttcaggaagtgccgtcagcgtagtgacttccacctacgcaacc
gacctcaacgaagtggcaggacctatccaaaccgaaaaactttcgggtgtatccttaaac
gtaagcacttctacctacacacccaatgttaatggagttgaagtaactgctcaaacggag
gcgccttcaggcgcctttacccctatggatttgggtaccctttccaaccccacttctctc
aacacagactggagcaaacagagcatttattttatcatgacagaccgtttcagcaacgga
gatacatccaacgataactacggtggcttcaattccaacaacaacgatcaacgcaagtgg
catggtggcgattttcaaggtattattgacaaactcgactacattaaaaatatgggcttt
accgcgatctggattaccccggtaacgatgcaaaagagtgaatacgcttaccacggctat
catacgtatgatttttatgcggttgacgggcatctcggaacaatggacaagttccaagag
ctggttcgcaaggcacatgacaaaaatattgctgtgatgctagacgtagtagtgaatcac
acaggtgattttcagccggggaacgggttcgccaaggctccttttgacaaagcagattgg
taccatcacaacggtgacattacagggggggactacgactccaacaaccaatggaaaatc
gaaaacggtgatgtagctggactggatgacttaaatcatgaaaaccctgctaccgccaac
gagcttaaaaactggatcaaatggctgcttaatgagacaggcatcgatggactgcggttg
gatactgtcaagcatgtaccgaagggttttctaaaggattttgaccaagccgccaatacc
ttcaccatgggtgaaattttccatggcgaccctgcttatgtgggggattacacccgatat
ctcgatgcagcactagattttccgatgtattatacaatcaaggacgtgttcggacacgat
caatccatgagaaaaatcaaggaccgctactccgatgatcgttactatcgtgatgctcag
actaacggtgtatttatcgacaatcatgatgtaaaacgtttcctgaatgacgcctctggc
aagccgggtgctaactatgacaaatggccacagctcaaagctgcattgggctttactctg
acgtcgcgtgggattccaattatctatcaaggcacagagcaaggctatagtggtggagat
gatcccgccaatcgggaaaatatgaatttcaacgccaaccatgacctgtatcagtacatc
gctaagctaaacaatgtgcgcaataaccaccctgctctgcaaaacggcagccaaaaggaa
aaatgggtggacgactccttttacagttttcagcgctctaaaaatggcgacgaggccatc
gtatttatcaacaactcctggaatagtcaaacccgcacgattggcaacttcgataatctg
tccaacggaacccgcctgactaaccagctgagcaacgactccgttcagattaacaacggt
tcgatcactgtgactcttgctccaaaggaagttaaaatcttcaccaagtaa
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