Physcomitrium patens (spreading earthmoss): 112274050
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Entry
112274050 CDS
T01041
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112274050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112274050
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112274050
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112274050
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Topoisomerases
112274050
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
112274050
FA (Fanconi anemia) pathway
112274050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-GRF
Toprim
zf-C4_Topoisom
zf-CCHC
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
112274050
NCBI-ProteinID:
XP_024358959
LinkDB
All DBs
Position
21:6365903..6376306
Genome browser
AA seq
974 aa
AA seq
DB search
MARPIRVLNVAEKPSVAKSVAVILSRGNVRTRNGRSVYNKIFEFGYTIGGQQCDMLMTSV
TGHLMELDFEDQFRKWHSCDPVDLFQAPVRKKVPQDKVNLQKTLEEEARHCQWLVLWLDC
DREGENIAYEVVDVCRASNARINIWRAHFSALIDREIHHAVQHLGRPNKMYADAVDARQE
IDLRIGASFTRFQTMLLSDSFVMPFGEDDKKLVLSYGPCQFPTLGFVVERYWQIQAHVAE
DFWAIKCFHKAEDGSAEFSWARGRLFDELAAFIIYEMCMERPTATVCQVTGQEKRKFPPV
PLNTVELQKRASRYFRMGSEQTMKVAEELYQAGFISYPRTETDKFSENQDLQSIVNEQIG
HSAWGQYAQRLLDPQQQLWKQPGDGGHDDKAHPPIHPTRFSEGEGNWTNDHARIYELVVR
HFLACVSQPAIGYGTTATIDIAGERFTATGLMITAKNYLDVYRFDNWGTSTIPKFEVGQQ
FIPTRLTLEVGRTQPPPLLSEADLISLMDKAGIGTDATMHDHIKKLLDRCYATKDANTRF
CPTTLGEALVMGYDSMGHELWKPDLRALMESDMKAVSDGRKTKPQVLEAALEGMKSLFIS
ARTQKEKLLDAMGIFFERSAGGDEQRQAGERVRLCPLCQQNTMILRKKPDGKFMVGCSGY
PNCRNVVWLPGPAIEASVTNQPCISCGPGQVLKIYLKFRRGEIPPNFDVEHTGCVGCDRV
IKELIEICGTGPRPTPGGTGPPTGQSSRPGIPRAFPNTFGNGNAAGGSGYMSGNSNGFGN
NSSFVTGREASQRNCTNCGQSGHYNMDCPRNQQGRVSNRNQDRRRNDPSVPPASGREGVR
CDCGKPCKLLTANTEANRGRRFHRCPTGECEFFQWEDASAVHPPAPDPVPTQRGQGRARG
GRRERASTKTTVRSRSTRTVVSSSSGSSRSSGARGGQSNSSRGTFVSATGESAGSCFKCG
QSGHWANACPSRNM
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcctattcgagttttgaacgtggcggaaaaaccttctgtggcgaaatctgtg
gcagttattttatcccgcggcaatgtacggactcggaatgggaggtctgtgtataataag
atttttgaatttggttacactattggagggcaacaatgcgacatgcttatgacctcggtg
acaggccatcttatggagctcgactttgaggatcaattccgaaaatggcattcttgtgat
cctgtagatctctttcaggcgcctgtgcgaaagaaagtgcctcaagataaagtgaatttg
cagaagactttagaagaagaagctcggcattgtcaatggctcgtgctatggctagattgt
gatcgggagggtgagaatatcgcgtatgaagtagtggacgtctgccgcgctagcaatgca
cgtattaacatctggagggcgcatttttctgccctcattgacagagaaatacatcatgca
gtccaacatctaggtcgccccaataagatgtatgctgatgctgttgatgctcgccaggag
attgatttgcggattggggcatcattcactcgttttcaaactatgctgctctcagattcc
tttgttatgccatttggtgaagatgacaagaagcttgtactgagctatggaccctgccag
tttccaactctgggatttgtggtggaacgctactggcaaatacaagctcatgtggcagag
gatttttgggccattaagtgttttcacaaggcggaggatggcagtgctgagttctcttgg
gcacgtgggaggctctttgatgaacttgctgccttcattatttatgaaatgtgtatggag
cggcctactgccacagtctgtcaagtcactggacaggaaaaacgaaaatttccacctgtt
cctctcaacactgtcgaattgcagaaaagggcctctcggtattttcgaatggggtcagaa
caaactatgaaggtggcagaggaattatatcaagcaggattcattagttatcctagaaca
gagacagataaattttctgaaaatcaagatttgcagtctatagtgaatgaacaaatcgga
cactctgcttggggtcagtatgcacaacgtcttctggaccctcaacagcagttgtggaag
cagcctggtgatggtggtcatgacgataaggctcatcctccaatccatcctactcgtttt
tccgaaggtgaaggcaactggacaaatgatcacgcgagaatttacgagcttgtcgtacgc
cactttttagcctgcgtctctcaacctgccattggctacggaaccactgcaactatagac
attgctggagagaggttcactgctacaggccttatgatcacagcaaaaaattatcttgac
gtttatcgattcgacaattggggtacttctacaattccaaaatttgaagtgggtcagcag
tttatacctactaggctgactttggaggttggcagaacgcagcctccacctttgctcagt
gaagcagacctcattagtcttatggacaaggcagggataggtacagacgcaactatgcac
gaccatatcaagaagttattggaccgttgctatgccacaaaagatgctaatacacgcttt
tgtcccacaaccctcggggaggctttggttatgggatatgatagcatgggacatgagctg
tggaagcctgatcttcgggctctaatggagagtgacatgaaagctgtgagcgatggtagg
aaaacaaaacctcaagttcttgaggcagcattagaaggaatgaagagtctcttcatcagt
gctagaacgcagaaggaaaagctgttggatgcgatgggtattttttttgaaaggtctgca
ggtggagacgagcaacgacaagcaggagaaagagtgcgactctgtccactgtgtcagcaa
aataccatgattcttcggaagaagccggatggcaagtttatggtcggatgctccggttac
ccgaattgcagaaatgtggtttggttacccggacctgcgattgaggcatctgtgaccaat
cagccttgcatttcttgtggacctggccaggtcttgaagatatatttgaaatttcgtagg
ggtgaaatacctcccaacttcgatgtggagcacacaggttgtgtgggctgtgatcgggtt
atcaaggagttaattgaaatttgtgggacaggtccacgtcctactccaggcggcactgga
ccaccaactggtcaatcctctaggccgggtatacctagggcatttccaaatactttcggc
aatggcaatgcagctggtggaagtggctacatgtctggaaatagcaatggttttggtaac
aactctagttttgtgactggacgggaagcaagtcaaagaaattgtacaaattgtgggcag
tcgggacattacaatatggattgtcctcggaatcagcaaggtcgcgtctcgaaccgcaac
caagatcgaagacggaatgacccatccgtgcctcctgcttcaggaagggaaggagtacgt
tgcgattgcggcaagccgtgtaaattgctaaccgctaacacagaggcaaatcgtggcaga
cgatttcaccgttgtcctactggtgaatgcgaattcttccaatgggaagacgcttcagct
gttcaccctccagcaccagatccagtaccaactcaaagaggtcaagggagagctcgaggt
ggtcgaagggagcgagcatcgacaaaaactacagtaagatccaggagtaccagaacagtt
gtaagttccagctctggaagctcgaggtctagtggggcgcgaggagggcaatcaaattcc
tcaaggggcacctttgttagcgcaactggagagtctgctggctcctgctttaaatgtggg
caaagtggacactgggcaaatgcttgcccctctcgaaatatgtag
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