Physcomitrium patens (spreading earthmoss): 112274105
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Entry
112274105 CDS
T01041
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00061
Fatty acid biosynthesis
ppp00071
Fatty acid degradation
ppp01100
Metabolic pathways
ppp01212
Fatty acid metabolism
ppp04146
Peroxisome
Module
ppp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112274105
00071 Fatty acid degradation
112274105
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112274105
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppp01004
]
112274105
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112274105
Enzymes [BR:
ppp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112274105
Lipid biosynthesis proteins [BR:
ppp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
112274105
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of breast milk
112274105
Exosomal proteins of breast cancer cells
112274105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Pullulanase_Ins
Motif
Other DBs
NCBI-GeneID:
112274105
NCBI-ProteinID:
XP_024359039
LinkDB
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Position
21:complement(6414434..6419571)
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AA seq
697 aa
AA seq
DB search
MGAFFVVLVPVVVTTYLLGERKKKRIKQQAVTVENVGGEKGLTKRNARFDKLVETPREGA
DTLASLFEQSCAQHSGNRFLGTRVLLKRETEVSEDGRKFEKVTLGQYEWTTYAQAFLRAS
DFASGLVALGHGQGERVAIFSETRPEWLLALQACFRRNLTVVTIYASLGEDALVHSLSET
EVSTVICDSKQLKKIVDLSDKLGTVKRVIYMEDDDTVTSEPSMEGKVIARFSHVEKLGKQ
SPAQPDMPRPSDIAVIMYTSGSTGMPKGVMMSHKNIVATIAGVTASVPKLNTSDVYLAYL
PLAHILELAGESTLFAAGAAIGYGSPLTLTDTSSKIKFGTKGDATELQPTLMSAVPAILD
RVRDGVRKKVNTKGGITKKLFELAYYRRLAAIEGSWFGAWGLEAMLWNVLVFRKIRSALG
GRVRGMLSGGAPLSGDTQRFMNICFGCPIGQGYGLTETCAGGTFSNWEDMTVGRVGPPVA
VCYLKLVNWDEGGYKYTDAPMPRGEIVIGGPNVTMGYFKNQAKTDEVYKVDEKGMRWFYT
GDIGRFHEDGCIEIIDRKKDIVKLQHGEYISLGKVEAVLSASLYVENIMLHADPFHSYCV
ALVVVSQSALEGWAQDANVDYSDFADLCSKTQAIKEVLSSLTKIGKENRLEKFEIPMKIK
LMSELWTPESGLVTAALKLKRENIRKTFAEDLKSLYQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgttttttgtggtgttggtgccagtggtggtgacgacgtatttgctgggagaa
aggaagaagaagaggattaagcagcaggcagtgacggttgagaatgtgggtggagagaag
ggattgactaagcggaatgcgcggttcgataagttggtggagacgcccagggagggagct
gacactttggccagcctgtttgagcagtcttgcgcgcagcattcgggaaatcggtttctg
gggactcgggtactgttgaaacgtgagacggaagtatccgaagacggccgaaagtttgag
aaggtgacgttggggcaatatgagtggaccacttacgcccaggcgtttctccgagccagt
gactttgcatctgggctcgtcgcgctcggtcatggacaaggtgaacgtgtggcaatcttc
tccgaaactcgaccggagtggttacttgcccttcaggcgtgtttccgccggaaccttaca
gtggttaccatatatgcgtctcttggagaggatgctctcgtccattcattgtccgagacg
gaagtttctacagtaatctgtgattctaagcagctcaaaaagatcgtggatcttagtgac
aaactcggaactgtgaaacgggtgatttatatggaagatgatgacacggttacttctgag
ccatcaatggagggaaaggtcatagcccggttttcacatgtggaaaagcttggcaaacaa
tcacctgctcagcctgatatgccccgcccttcggatatcgctgtcatcatgtataccagt
gggagcactggtatgcccaagggtgtgatgatgtcgcataaaaacatagtggccactatt
gctggagtaactgcttcagtaccaaaactgaatacaagcgacgtgtaccttgcctacttg
cctctcgcacatattttggaacttgcaggggagtcgacactttttgcagcaggagctgct
attggatatggttctccattgaccttgacagatacctcaagcaagataaaatttggtacc
aagggagacgcaactgaacttcagcctacactcatgtcggcagttccagcaattttggat
cgtgttcgagatggtgtgaggaaaaaggtgaacactaagggagggatcacgaagaagctt
tttgaattggcctactaccgaaggcttgctgccatcgaagggagttggtttggtgcatgg
ggtctggaggcaatgctctggaatgttctagtgtttagaaagattcgatctgctcttgga
gggcgggtcaggggaatgctctctgggggtgcaccactttcaggagacactcaacgattc
atgaatatctgctttgggtgtcctattggccagggctatggtctcaccgaaacttgtgca
ggtggaacattcagtaattgggaggatatgactgttggccgagtaggccctcctgttgca
gtgtgctacttaaagttggttaactgggatgagggtggttacaagtacacagacgctcca
atgccaagaggtgaaattgtgattggtgggcctaatgtgactatgggatacttcaaaaat
caagctaaaactgacgaggtttacaaggtggatgagaaggggatgaggtggttttatacg
ggagacattggccgctttcatgaagacggatgtatagaaattattgatcgtaagaaggat
attgtgaaattgcaacatggagaatatatatcactgggaaaggtggaggctgtgctttca
gcaagtctttatgtggagaacatcatgctacacgcagatccttttcacagctattgcgta
gctcttgtcgtcgtatctcaatcggcactagaaggctgggctcaggacgctaatgtggat
tacagtgattttgctgatttatgttcaaagacacaggctatcaaagaggttttatcctcc
ctcacaaagattggcaaagagaatcgtttggagaagtttgagattccaatgaagattaag
ctgatgtctgagctctggacccccgagagtggtctggtgactgctgctttaaagctgaaa
agagagaacattagaaaaacttttgccgaggatttaaaatctttatatcagtaa
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