Physcomitrium patens (spreading earthmoss): 112275069
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Entry
112275069 CDS
T01041
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like isoform X1
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00061
Fatty acid biosynthesis
ppp00071
Fatty acid degradation
ppp01100
Metabolic pathways
ppp01212
Fatty acid metabolism
ppp04146
Peroxisome
Module
ppp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112275069
00071 Fatty acid degradation
112275069
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112275069
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppp01004
]
112275069
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112275069
Enzymes [BR:
ppp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112275069
Lipid biosynthesis proteins [BR:
ppp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
112275069
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of breast milk
112275069
Exosomal proteins of breast cancer cells
112275069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112275069
NCBI-ProteinID:
XP_024360808
LinkDB
All DBs
Position
22:complement(4882053..4891093)
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AA seq
728 aa
AA seq
DB search
MWIVFRASFLDSAVLKKTRKGEMEADSVAMETAQNRRMRIMNAHLQRKAPKDSLQLTSQT
TAGEFLIEEGYSVRLPEKLSSGKWNVHRSAMSPLELMDHWPEHPEIRTLHDNFVYAKAAF
PENKCLGTRIREDGTVGEYRWMTYGEVGTARTAIGSGLIQHGIPKGACVGLYMLNRVEWV
ISELACSAYSYVSVPLYDTLGADAVKYIVSHAEVAAVFCTPDKLQTVLNCLSELPSVRLI
VVVGGAEHIMPSHPPRSGVEVVPYSRLEAQGKADQRAFVAPKPHDLATICYTSGTTGVPK
GAMLSHYSLVASAAGASQSTPILPSDVHISYLPLAHIYERMNVLVMLHHGVAVGFYQGDI
LKLMDDIETLKPTIFASVPRLYNRIYDKITGTVRASGGLREKLFNIAFESKKQALENGKS
PSPIWDRLVFNKVKAALGGRVRIILSGASPISADVLDFLRICFGGYVSEGYGMTETSCLV
SGTRVGDNTSGHVGAPTPACEVKLADVPEMEYTDNDKPYPRGEICVRGPILFKGYYKDEV
ETREIFDEEGWLHTGDIGCWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENIYLRSRFIS
QCFVYGDSFNANLVAVAVIDPDTLPAWAKSRGIKHADNLKELCADPVIRAAVLADMDAAG
REAQLRGFEFAKAVKLTAEPFSIENGLLTPTLKLKRPQAKTRFAQAIADMYAEVAVKEET
RFPLKSSL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtggattgtttttcgtgcttcctttttagattctgcagtacttaaaaagacaaggaag
ggggagatggaagctgattccgtggcaatggagaccgcacagaacaggcggatgcgcatc
atgaacgcccatctacagagaaaggccccgaaggacagtctacaactgaccagccaaaca
actgctggtgaatttctaatagaggaaggatatagcgttaggctgccagaaaaattgagc
tccggaaaatggaacgtacatagatcagcgatgtcccctcttgagcttatggatcattgg
cccgagcatcccgagattcgaaccttgcatgacaactttgtgtatgcgaaggcggcattt
ccagagaataaatgtttgggaactcgtatccgagaagatggcacagttggcgaatatagg
tggatgacttatggagaagtagggaccgcgcggactgcaattggatcaggacttattcag
catggcatccctaagggcgcatgtgttgggttgtacatgcttaatcgagttgaatgggtc
atctcagaattagcatgttctgcgtactcttatgtgtctgttcctctttatgacaccctt
ggagcggatgctgtgaagtatattgtcagccatgcggaagttgctgctgtattctgcacc
ccagacaagttacagactgtcctgaattgcctttcagagctcccaagtgtacgcctcatt
gtggttgtaggcggtgccgagcatataatgccctcgcacccaccccggtctggagttgaa
gtcgtgccttactctcgacttgaagctcagggtaaagcagaccagcgtgcatttgtggca
ccaaagccacatgatctagccaccatatgttacacaagtggtaccactggtgtacccaag
ggagctatgttatctcattacagccttgttgcaagtgctgctggagctagtcaatcgacg
cccatccttccttctgacgtacacatctcgtatttgccactagctcatatttacgagagg
atgaacgtacttgtcatgctccatcacggtgtggcggttggcttctatcaaggagatata
ttgaagctgatggatgatatagagactctgaagcctacaatttttgcaagtgttccacgc
ctttacaatcgtatttatgataaaatcactggaacagtgagggcttcaggtggactccgt
gagaagcttttcaatattgccttcgagtcaaagaaacaggccctcgagaacggcaagtct
ccttcacctatctgggaccggttggtttttaacaaagtgaaggcagctcttggaggacga
gttcggattatattgtcaggcgcatcaccaatatctgctgatgtcttggatttcttaaga
atatgttttggtggttacgtttcagaaggctatggcatgacggagacttcttgtcttgtt
tctggtacacgagtgggggacaatacatccggtcacgttggagctccaaccccagcttgc
gaggtgaagcttgctgacgttcccgagatggagtacacagataatgacaagccttatcct
cgaggagagatttgtgtgagaggacccatattattcaaaggctactacaaagacgaagtt
gaaacacgggaaatttttgatgaagaaggatggttacatactggcgatattgggtgttgg
ttgccaggtggtcgtctcaagatcattgacaggaagaagaacattttcaagttagctcaa
ggagaatacattgcaccggaaaagattgagaacatttatcttcgcagtcggtttatttcg
cagtgtttcgtatatggcgatagtttcaacgccaacctcgtagcagttgctgttattgat
ccagacactctacctgcctgggctaaatcaaggggtattaagcatgctgacaatttgaaa
gagctatgcgctgatccagtcatacgagctgcagtgcttgcggacatggatgctgctggt
cgtgaagcacagctgcgagggtttgagtttgccaaagcagtgaaattgacagctgagcct
ttctcaatcgaaaatggactactcacacctactcttaagttgaagagacctcaagccaag
actcggtttgctcaagccattgctgatatgtatgctgaggttgcggtcaaggaagaaact
cggttcccacttaagtctagcttgtaa
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