Physcomitrium patens (spreading earthmoss): 112276354
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Entry
112276354 CDS
T01041
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112276354
Spliceosome [BR:
ppp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112276354
Complex C
U4/U6.U5 tri-SnRNP related factors
112276354
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
DUF4042
Motif
Other DBs
NCBI-GeneID:
112276354
NCBI-ProteinID:
XP_024363362
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All DBs
Position
24:complement(4432028..4435128)
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AA seq
738 aa
AA seq
DB search
MATAVGVRQEERWGAGAEEDGEYSREGYRGKDRRDADDRSRRAEHYRDRQERSKREEYSR
GRDRRDGEERYWRSGDERSRREGEDRPRSRRDDEERPRRNGEESYRVDEERRRERGDREE
RRRRDEEEESLEEAPKVVPEKVAVPEKASGRSGGVYIPPFKLAQMMKDVDDKSSVQYQRM
TWDALRKSINGLVNKVNASNIKNIIPELFGENLIRGRGLFARSCMKSQMASPTFTHIFAA
LVAVVNTKFPELGELLLKRIILQLKRAFKRNDKPVLLAAAKFIAHLVNQQVAHEILALEL
LTILLEKPTDDSVEVAVGFVKECGSLLQDVSPQGLHGIFERFRGILHEGEIDKRVQFMIE
GLFAIRKAQFQGFPAVLPELDLVDQEDQITHELSLDDELDQETGLDIFKVDPDFVENEKK
YEAVKKEILGDDSAGEVEDGDKESGDEDDEDESDEEDEEDREACMIIQDETETNLVNLRR
TIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCVMLLECCSQERTYLRYYGLLGQRFCMI
NRVYQEKFDICFVNQYSMIHRLETNKLRNVAKFFAHLLGTDALPWQALAYIRLTEEDTTS
SSRIFIKILFQELSEHLGLRKLNERLSDPSMQESFDGIFPKDNPKNTRFAINFFTSIGLG
GLTDNLREYLKNMPRMIMNQHVPVPSESDDSDADSDTSGGGSSSASSVSDSSSDSESDSE
SDSASDSSPEKPRKKRRT
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggtgggagtgcggcaggaggagcgctggggcgctggtgctgaagaagat
ggcgagtattcccgcgaggggtaccgtggcaaagaccgccgcgacgcggacgataggtct
aggagggcggagcattatcgggacagacaggagcggtccaagcgggaggagtactctcga
ggtagggatcggcgagatggcgaggagaggtactggaggagtggcgacgagcggtctaga
agagaaggggaagatagaccgcgttctaggagggacgatgaggagcggccgaggagaaac
ggagaggagtcgtatcgggtagatgaggagcggaggagagagaggggagatcgagaggag
agaaggcggcgagatgaggaggaggagtcgctggaggaggcgcccaaggtggtgccggag
aaagttgccgttccagagaaagcatctgggcgcagtggtggagtgtatattccgcccttc
aaattggcgcagatgatgaaagatgtcgacgacaagagctccgtgcagtaccagagaatg
acgtgggatgcgttgcgaaagagtatcaatggtctagttaacaaggtcaatgcatcaaac
ataaaaaacatcattccggagcttttcggtgagaatctgataagaggaagagggttattt
gcaaggtcatgcatgaagtcccagatggcttctcccactttcacccacatttttgcagct
ctggtcgcggtggtcaatacgaagtttccggagctaggcgagttattgctaaagaggatc
atcttgcaactaaaacgagctttcaagaggaatgataaaccagtattgctagctgccgcg
aaattcattgctcatcttgtcaatcagcaagtcgcacatgaaattctagcgcttgaactc
cttaccatacttttggaaaagcccacagatgacagcgttgaggtggccgtcggtttcgtc
aaggaatgtggatcccttcttcaagatgtttctcctcaagggctgcacggtatcttcgag
cggtttcgaggaatcctacacgaaggagaaattgataagcgtgttcaatttatgattgaa
ggcctttttgcaattcgcaaggctcaattccagggttttccggcagtgttaccagagcta
gaccttgtcgatcaagaggaccagattacacatgagttatcgcttgatgatgagttagac
caagagacgggacttgatattttcaaagttgatccagactttgtagaaaacgaaaagaag
tacgaagcagtgaagaaggaaattttgggtgacgattcagccggtgaagttgaagatggg
gataaagagtctggtgatgaggatgatgaggatgaatccgatgaggaagacgaagaagac
agggaggcatgcatgattatccaggatgaaacggagacaaatcttgtgaacttgcggcgt
actatttatcttactattatgtctagtgtggactttgaggaggctgggcacaagcttctt
aaaattaagttggaacctggacaagagatggagctgtgcgttatgcttttggagtgttgc
agtcaagaaaggacatatctgcgatattacggtctccttgggcaacggttctgcatgatc
aatcgcgtttatcaagagaagtttgatatctgttttgtgaatcagtactcaatgattcat
cgcctggaaacaaacaagcttcgcaatgttgcgaagttctttgctcatttgttgggcacg
gatgcgcttccttggcaagccctggcctatatccgactcacagaggaggatacaacttct
tcatctcgtatttttatcaagattcttttccaagagctttcagaacacttgggactgcgg
aaactgaacgaacgtctgagcgatccctcgatgcaagaatcttttgatggaatctttcca
aaagataatccaaagaacacgcgtttcgccatcaacttcttcacttccattggtttgggt
ggtcttacagacaacctgcgtgagtacctaaagaacatgccacgcatgatcatgaatcaa
cacgtacccgttccaagcgagagtgatgactcagatgcagactcggacacttcagggggc
ggcagttcctcagccagcagtgtttcagattcgagtagcgacagtgaaagtgacagtgag
agtgacagcgctagtgacagcagtccagagaagccacggaaaaagagaagaacgtga
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