Physcomitrium patens (spreading earthmoss): 112276935
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Entry
112276935 CDS
T01041
Name
(RefSeq) E3 SUMO-protein ligase SIZ1-like isoform X1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MIZ
SAP
PHD
zf-Nse
PHD_5
ASH2L-like_WH
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
112276935
NCBI-ProteinID:
XP_024364527
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All DBs
Position
24:8848913..8857233
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AA seq
849 aa
AA seq
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MADVASRCQSQLGSFRIRELKDVLARLGLPKQGKKQILIDKIMDLINPAEKESLAKAGSK
SSKKAISGDEAIAIVDEQYRKLRSIGTDLSRHKSAKSASSSGYPSPGLDESRCPCGSSVE
AGRMIQCDSHGCRIWQHRSCVDFPKKPKDGVPVETPPNFYCELCRISQGDPFCEALFHPL
LPVKFPSSTAKSERAITLQSIDEQFTLSLAHQELLQSPNYDLQVWCVLLSDKVSFRMHWP
LSAVLRVNDANVRVTNRPAEQPLGANSRDEGHSITSYTREGLNRLNMSCDDARPFCLGVR
IIRRRSLEEVMDMIPNEKDGEPFDEAVARVRRCINGGGGQGLGSDDDGADSDLEIVAESL
TVNLRCPMSGSQIKVAGRFKPCPHMGCFDLDTYVEMNQRTRKWQCPICLKNYSIEHLIID
PFFNRITNALRTLDEDVTEVELKADGSWRPKLEGNVKNGEPWSPSPAAAVAIVSNGNKSA
PVLFSSHHVKIEAGRSSHDHGSLQLKWTPEVQRVVNGRNYRNGGPSLQVMPLPRLSRSSS
ATGSNLKVGEDENSVNQDASEKNTVSMDDTDVEFLSILQEAARGTWQASGDDPANGGDII
VLSDSDDGEDEVTVVGSSHVSMYSDVIGNGGVRFSEGRVPNDINGDPSRFALGLGQYEYY
GSQTEAVALQHPPLQPTPVEVVGSSDFLCTSLIGNDPSQLDWESFGQSHTPTLYEVIDSE
SIDINKDGSPLQNLLPSQPARSEVQENLRDLTLPAEVMDNSWFSLSLGGIGNVVKPTPER
SLFTTSIEWCSPISQPGVNEYDPHGLGSNGSSQHLMDSRHPLRGHFTADGYPFPVRPCSG
HIHARRVSR
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtagcgtctcgctgtcagagccagttgggctcatttcgcatcagggaactg
aaagatgtcctggcgcgactgggtcttcctaaacaaggaaagaagcagatcctcattgac
aagatcatggatttgatcaatcctgcagagaaggaatcgctagcgaaagcaggctctaaa
agtagcaaaaaagccatttcaggagatgaagcaattgctattgttgacgagcaatacagg
aaacttcgaagtattggaactgatttatctaggcataaatctgctaagtctgcatccagc
agtggatatccttcacctgggcttgatgaaagtcgttgtccttgtggaagtagcgtggaa
gctggacgcatgattcagtgtgatagtcatggatgtcggatctggcaacataggagttgc
gtcgattttcccaagaagccaaaagatggagttccagttgagactccgccaaatttctac
tgcgagctttgccgcatatctcagggagatccattttgtgaagcactttttcaccctctg
ctgcctgtaaagtttccttcttccacagccaaatcggagagagctattactctacagagc
atagatgagcagtttactttgagtcttgcgcaccaggaactgcttcagagtccaaattac
gatctgcaggtctggtgtgtgctcttgagtgacaaggtttcctttcgcatgcactggcct
ctttcagctgttttacgtgttaatgatgcaaatgtgcgggttactaatcgacctgctgaa
caacctttaggcgcaaatagtcgagatgaaggacatagtatcacttcatataccagagag
ggactgaacaggctgaacatgtcatgtgatgatgctcgcccattctgtttaggagtgcga
atcatccgccgccgttcccttgaggaggttatggacatgattccaaatgagaaggatgga
gagccttttgacgaggccgtagctcgagtacggcgatgtataaatggagggggtggtcag
ggattaggcagtgatgatgacggtgccgatagcgatttggaaattgtggcggagtctctc
actgttaacttgcgctgcccgatgagtgggtcccaaatcaaagttgcaggtcgttttaag
ccatgcccacacatgggttgctttgatcttgatacatatgtggaaatgaatcagcgaacg
cggaagtggcaatgtcctatttgtttgaagaactactctatagaacatctgatcatcgac
ccttttttcaatcggattacaaatgcgttgagaactctggatgaagacgtcactgaggtg
gagctcaaagctgatggctcgtggcggcccaaactggaagggaatgttaagaacggagag
ccttggagtccatcaccagcggctgccgtagcaattgtctctaatgggaacaaatcagca
cctgttctattttctagccatcatgtcaaaattgaggcgggccgttcttctcatgatcat
ggctctttgcaattgaaatggacacctgaagttcagagagtcgtgaatggcaggaattac
cgaaatggtggcccaagcctgcaagttatgcccttgcccagactttcaagaagtagcagc
gcgactggtagcaatcttaaagtaggcgaggatgaaaatagtgtaaatcaagatgcaagt
gagaaaaacactgtatccatggatgacaccgatgtggaattcttatcaatacttcaggaa
gcagctagaggaacgtggcaagccagtggtgatgatcctgcgaatggaggtgatataata
gttctcagtgattcagatgatggagaagatgaagtaacagttgtcgggtcttctcatgtt
tcgatgtactcggacgtcatcggcaatggaggagttcgtttctcagagggtagggtaccc
aatgatataaatggtgatccatcacggtttgcccttggtttagggcaatatgagtactat
gggtcacaaacagaggcggttgcgctgcaacatcctcctttgcaaccaacaccagtggaa
gttgtaggaagttccgatttcctgtgcacttctttgatcgggaatgatccatcgcaatta
gactgggaaagttttgggcagtcacatacccccacactttatgaagttattgatagcgag
agtatagacattaacaaagatggttcgcctttgcaaaatcttctcccatcccaaccagct
cgatctgaggtccaagaaaatttacgggacctaacactccctgcagaagttatggacaac
tcttggttttcacttagccttggcgggataggaaatgtggtaaaaccaactccagaacga
agtttatttactacttcaatagaatggtgttcgccaatttctcaaccaggagtcaatgaa
tacgatcctcatggtctgggtagcaatggatcatcccaacacctaatggactcaagacat
ccattgcgcggtcattttaccgcagacggttatccttttccagtaaggccctgcagtggc
cacattcatgcacggagagtttcccgttaa
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