Physcomitrium patens (spreading earthmoss): 112278959
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Entry
112278959 CDS
T01041
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112278959
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112278959
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Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Motif
Other DBs
NCBI-GeneID:
112278959
NCBI-ProteinID:
XP_024368680
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Position
2:9498859..9507020
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AA seq
804 aa
AA seq
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MAGGRTQKNKAHKTRFASKSSRNAHKLAAGEKVIGKGPARVPLPGQAARDIRLQRNKNIR
EQKRAGVLAEKRATSSSSSAPRILALVGLSAKANVEALKDRILSACRTEEANGTTGQNDN
SMDMDSAVVRESKETGSITVVVPRFKLRLTIIQAPRNDLQGCLEVAKVADIVAFVGHVMP
EEGGYIDQIGKKSLSMLRSLGLPVTTGLLVGLDDVSAKKKSEVKKSAQAALQSELLEDTK
MHVADSQEECQQVLRHLAEQRLSNPAWRAQRPFVVGNQLEYEEDSSSPGTGILRLAGYVR
SRAISVNQLVHLAGVGDFQLKQIDMVEDPCPLRQQKRHTSGDVMQVENDPGAQKASSSVA
ANAAVQEPLIVENTPDDLAGEQTWPTEEELAQAGKANRRKKKRVLPKGTSEYQAAWIVED
SDQEEGGDDDDAMEGDGLDDQAMDDDREGSEISEDDRKTSVWDDDDDTRSEMMDEENLTL
EQRKAEIERLKAAHAADEEFPDEVDTPSDIPARQRFAKYRGLKSLRTSPWDPKESLPFEY
AKIFDFDNFVRTQKTVLAKAKELDSCTQEGCFAAGCYVRLHVLKVPASKAELLLKSYKTN
PVVVCGLLQHESKMSVLHYSIRKSEGYTDPIKSKELLVFHSGFRRHHTRPIFSTDDLNMD
KHKFERFLHPGRFSIASVFAPISFPPLPLIVFKESDLPEGVSMVATGSLRSVDPDRIILK
KIVLSGYPLRVQKRKAVVRFMFHNPEDVRWFRPLELWTKYGRRGRIKEPVGTHGSMKCVF
DGVVQQRDAVCVNLYKRVYPKWPQ
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggtaggacacagaagaataaggctcacaagacacggtttgcgtccaagtcg
tcccgcaatgcccacaaattagcagctggtgaaaaagtgattggcaagggtcctgcgcgt
gtgcctctgcctggtcaagctgcccgggatattaggcttcagcgaaacaaaaacattcgt
gagcagaagagagccggtgtattggcagagaagcgtgcgaccagcagctcttccagtgct
cctaggatcttggcccttgtaggtctctctgcaaaagctaatgttgaagctttgaaggat
cggatactttcagcatgccgcaccgaagaagcaaacggaacaaccggtcaaaatgacaat
tctatggacatggatagtgctgttgtacgagagagtaaggaaactggatcaataactgtt
gtcgttccccgcttcaagcttcgccttacgatcatacaagctccacgaaatgatcttcaa
ggatgtcttgaagttgcgaaggtggcagatattgttgcatttgttggccatgttatgcca
gaggagggtggttatattgatcagataggaaagaaaagtttgtctatgttgcgatcacta
ggcctgccagtgactacaggacttttagtggggctagacgatgtttcggcgaagaagaaa
tcggaagtcaaaaaaagtgcacaagcagccttgcaatctgagcttctagaagacacgaaa
atgcatgttgctgattctcaagaggagtgccagcaggtgttgcgccacttagcagagcag
cgactatcaaaccctgcatggcgcgctcagcgtccctttgtggtcggtaatcagcttgaa
tacgaggaagatagttcttctccaggaactggtattttgcgtttggctggttacgttcgc
tctcgagccatctctgtcaatcagctggtccatttagccggagtaggtgattttcagctc
aagcagattgacatggtggaggatccatgtcctctgaggcagcagaagcgacatactagt
ggagacgttatgcaagtggaaaatgacccgggagcccagaaggcgagctcttctgtagcc
gcgaacgctgctgtgcaggagcctctcattgttgagaatacccctgacgatcttgctgga
gaacagacttggccaactgaagaagagcttgcacaagctggaaaggcgaatcgtcgaaag
aagaaacgtgtgttaccaaaaggcacatctgaataccaggctgcatggattgtggaagat
tctgaccaggaggaagggggtgatgatgatgatgccatggaaggtgatggtttggatgat
caagctatggatgatgatagagaaggtagtgagataagcgaagacgatagaaaaacatct
gtttgggacgatgacgatgacacaaggagcgaaatgatggatgaagaaaatctgactctt
gagcaaaggaaggcagaaatagagcgtctgaaggcagctcatgctgctgatgaagagttt
cctgacgaggtggacactccaagtgatattcccgctcgtcagcggtttgccaaatacagg
ggtttgaagtctcttcggacttctccatgggatccaaaggaatcgttgccattcgagtat
gccaagatctttgacttcgataactttgttagaacccaaaagactgtgttagcaaaagcc
aaagaactggactcatgcacgcaagaggggtgctttgctgctggatgctacgtgaggcta
catgttcttaaagttccagcctccaaagctgagctcttgttaaagtcgtacaagacgaac
ccagttgtggtgtgcggccttttacaacatgaatccaagatgtcagttctgcactatagt
ataaggaagagcgaaggttatacggatcccataaagtcaaaggagttgttagttttccac
agtggctttaggcgacatcatacaaggcctattttttctactgatgatcttaacatggac
aagcataagtttgaaaggtttcttcatccgggtcgtttctctattgcctcagtttttgcc
ccaataagtttcccacctctcccacttattgtatttaaagaatcggatctaccagaagga
gttagcatggtcgccactggttctttacgaagtgtggatccagatagaataatattgaag
aaaatagttctatcaggatatccacttagagttcagaaacgaaaagcagttgtccgtttc
atgttccacaatccggaagatgtgcgctggtttaggccgttggagctgtggaccaagtat
gggagaaggggtcggattaaagaacctgtgggcactcatggttcaatgaagtgtgttttt
gatggagtggtgcagcaaagggatgcagtgtgtgtaaacctgtacaaacgtgtgtacccc
aaatggccacagtaa
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