KEGG   Physcomitrium patens (spreading earthmoss): 112280158
Entry
112280158         CDS       T01041                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5-like isoform X1
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppp03041]
    112280158
Spliceosome [BR:ppp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112280158
 Complex B
    112280158
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 112280158
NCBI-ProteinID: XP_024371055
LinkDB
Position
3:17285117..17290593
AA seq 829 aa
MSRKDKRKELKKLKRKQLRREAALLSAAEEVEEHAEEEEEEVLAKERAEHEEQERLWLLR
EEESHKEWLRKQEEEIERKRKEDERTCKGEDGEDLEEGWEYVEDGPAEIIWQGNEIIVKK
PRKKVKKGTNSGVLAIEEKDRPASNPLPPQSTAFSSYQANAQDLTDQNTNFGTEQDKRNC
PFYIKTGVCRFGVRCSRLHPVFNEACTLLMRSMYTGAGLALEQVESLEVCAGINILLTVT
FIRAHLMELWPEVEYTDEEVAQEYEEFYDDVHSEFIQFGELVNFKVCRNGSPHLRGNVYV
HYASQESAMLAYNHMNGRFYAKKQISCEFVGVKKWKIAICGEFMRTNYKTCSHGSACNFM
HCFENPRREYEWADLDRPPPRFWQRKMAKLFGHAYISDEDFDEKQEKVRSHRESTYSNHM
VRHRGDSVSTYDDDRRKDRHMKESVREDEHRRRSDGREQKYCEDETKDRISRESKYDDRR
RVKHSRDNNHDTLRREKDFRDSTHHDDSARDKSASRSMDDDDDDANDDERYFQGHKKFER
WSPGRHGETDGREAVYSKDQRRGHKGASYDYEDIDIGDARHVARNSITSDAAYHSHSRSH
SHHSERHRSRRRSRSPDGHKSRRSRSRDRSMSHSARGEDGYYSVGEHQHRYSKTIRDNER
SSKESKQHRQRSSTQSSNDAFGNQEASQTLEGRVDEDVNRHRKRHSSQDRRKYSESEHDQ
SLTTQESDHTRIRHSKDLVGTIAAPTTDEDTSGNLSNLERQSGLEVGIDVASQNQETDGS
SSSDTVTGLSLVLTTDDVQKSTSQWQSWRKAKAKKAKLGMKDHPPRLVI
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgtcgcgtaaggataagcggaaagagttgaagaagttgaagaggaagcagcttcgacgg
gaggcggctttgctgagtgcagcggaggaggttgaggagcatgcggaggaggaggaggag
gaggtgttggccaaggagcgagccgagcatgaggagcaggagcggctgtggctgctgaga
gaggaagagtcgcacaaagaatggttgcggaaacaggaggaagaaattgagagaaagcgg
aaagaggatgagcggacttgcaaaggcgaagatggtgaagatcttgaagaaggctgggaa
tatgtggaggatggtcctgcagaaatcatttggcaagggaacgaaatcattgtgaaaaag
cctaggaagaaagttaagaagggcaccaactcaggcgtgctggccattgaggagaaggat
agaccagcctcaaatccgctgcctcctcagagcactgctttttccagttaccaggcgaat
gctcaagatcttactgaccagaatacaaacttcggaacagagcaggataagaggaactgt
ccattctatatcaagacaggcgtgtgccgttttggtgtgcgttgcagtcgtctgcatcca
gtgttcaatgaagcttgcactcttttgatgcgttccatgtatactggggctggccttgct
ttggaacaagttgaaagccttgaggtttgtgctggcatcaatatcctcttaacagtgacc
ttcatacgagctcatctcatggagttatggccagaagttgagtacactgatgaggaggtg
gcgcaagaatatgaagaattttatgatgatgtgcattcggaattcattcagtttggggaa
cttgtgaattttaaggtatgccgaaatggttcaccccatttgcgaggaaatgtttatgtt
cactatgcatcacaagagtcggcaatgcttgcatacaatcacatgaatgggcgattttac
gccaagaagcagatttcttgtgaattcgtaggagttaagaagtggaagatagcaatttgc
ggggaatttatgaggacaaattacaagacgtgttcacatggatcggcgtgcaattttatg
cattgtttcgaaaaccctcgcagggagtatgaatgggcagacttggatagaccaccccct
agattttggcagagaaagatggcaaaacttttcggacatgcttatatttctgatgaagat
tttgatgagaaacaggagaaagtgaggtcgcacagagaatccacttacagtaatcatatg
gtaagacacagaggtgacagtgtgtcgacatatgatgatgaccggaggaaagataggcat
atgaaagaatctgtgcgcgaggacgagcacaggagacgcagtgatggtagagaacaaaaa
tattgtgaagatgaaacgaaagaccgaattagtagagaatcgaagtatgatgaccgacgg
agagtaaagcattcaagggacaataatcatgatactctaaggagagagaaggattttaga
gattctacccatcatgatgattctgctagggacaagagtgcaagccgttccatggatgac
gatgatgatgatgcgaatgacgatgaaagatattttcaaggacacaaaaaatttgagaga
tggtctcccggtaggcatggggagacggatggcagagaggcggtttactctaaagatcag
agaagaggccataagggcgcttcatatgactacgaggatattgatattggtgatgctaga
catgtggctagaaactcaataacttctgatgctgcataccacagccatagtcgaagccac
agtcaccactccgaacgccatcgctccaggagaagatcaaggagtccagatggtcataag
tcccggaggtcaaggagtcgggacaggtcgatgtctcacagtgcgcgcggtgaggatggg
tactacagcgttggcgagcaccagcatagatattccaagacgataagagacaatgaacga
tcatctaaggagagcaagcagcacaggcagcgcagcagcacacaaagtagtaatgacgca
tttggcaatcaagaggcttctcaaactctcgaagggcgagtagatgaagatgttaacaga
catcggaagagacattctagccaagatcggcggaagtattcagaaagtgaacatgaccag
agcttgactactcaggaatcggatcataccaggattcggcattcgaaagatttggtaggc
acaattgctgcaccgacgacagatgaggatactagtggtaatcttagcaatctggagaga
caatcaggtctcgaggtgggcatagacgttgcgagccagaaccaagaaactgatggtagt
agtagcagtgacacggtgacagggttgagtttggttcttaccacggatgatgtccagaaa
agtacttctcagtggcagtcatggagaaaagctaaggctaagaaggccaagctcgggatg
aaagatcatcctccacggcttgtaatttga

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