Physcomitrium patens (spreading earthmoss): 112280372
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Entry
112280372 CDS
T01041
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like isoform X1
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112280372
03036 Chromosome and associated proteins [BR:
ppp03036
]
112280372
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112280372
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112280372
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
112280372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PHD
zf-RING_5
Prok-RING_4
TRAF3_RING
zf-RING_10
zf-rbx1
zf-RING_6
CUE
Motif
Other DBs
NCBI-GeneID:
112280372
NCBI-ProteinID:
XP_024371572
LinkDB
All DBs
Position
3:complement(14417766..14424169)
Genome browser
AA seq
842 aa
AA seq
DB search
MTDLPCDADGKCMVCKIVPPDSDAIMCGSCASPWHMRCLNPPMEFVPLGDWDCPDCSLPP
TIATPSAVVNSVPEACLVNKIRAIQADSTLSEAEKAKRRQELMSKGLNDESSAKLSSLNV
DKKSADGKKRNATLEMMDNSLNCIFCMQLAERPVTTPCGHNFCLKCFQRWVGQGKKTCGK
CRSAIPAKMASNPRINSALVMAIRMARSVGNSNGGPPKTYTYRDNDSRPDKCFTTSRAVK
TGKANACSGKIFVTIAPDHFGPITAEHDPTRGQGVLVGECWEDRMECRQWGAHLPHVAGI
AGQSDYGSQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSFDQKFDKMNEAL
RVSCKHGFPVRVVRSHKEKRSAYAPDAGVRYDGVYRIEKCWRKKGIQGHKVCRYLFVRCD
NEPAPWTSDEHGDRPRPLPVVEELRSATDVFERKSSPAWAYTEGVGWGWSREPPASKKTS
GSGPSEATQKRKQLSVQQRLLKEFGCNACRKVLNQPVSVPCGHNFCKGCLDSVFAGQDTS
RERKGVSGRSLRTQKIVKRCPNCKADITDFLVSPQINRQMEEIILTLQSSAKDEQGNDAV
EDDDGGEGSIPEDDDSTEAEAQEETKTATVELALPIVANVEECHSEPKVFTPEHPSVPSN
DTPENIAESNDTGDPALSALCQAFPDYSEDLLRGMLADQGGDVMELKTVLLALQKQQNQV
QSRQRGRIKKGCSSGSEILSNGGNSVAKDLLEEANVDGSAHSSSDQVENDVLNGNGLNTG
DSTQAEKANIPPKRQRENETKSNSRKKNRPPLVELPRRISRSRGCKETKVSHVDLTSDGD
FQ
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgacggacctaccgtgtgatgcagacggaaaatgcatggtatgcaaaatcgtgccacct
gacagcgatgcgataatgtgcggtagttgtgctagtccgtggcatatgcgatgtctgaat
cctcccatggaatttgtgcctcttggcgactgggattgtcctgactgttcgcttccaccc
actatcgccacaccttcggcagtcgttaactccgtacccgaggcctgtttagtgaacaag
attcgtgcgattcaagctgactcaactctctctgaagctgagaaagcaaaaagacggcag
gagctcatgagcaaagggttgaacgatgaaagttctgccaagttgtcttccttgaatgtt
gataagaaaagtgctgacgggaaaaagcggaacgcgacgttagaaatgatggataatagc
ctgaattgtattttctgcatgcagcttgctgaaagaccagtaactacaccttgtggtcac
aatttttgcttaaaatgctttcagagatgggtcgggcaaggtaaaaagacgtgcggaaaa
tgtcgaagtgcgattcctgctaaaatggcaagcaatcctcgcattaattctgctttagtt
atggccattcgtatggccaggtcagtcggaaatagtaatggcggtccaccaaaaacttac
acataccgtgataacgacagcagaccagacaagtgctttacgaccagccgagcggtaaag
actgggaaagctaacgcttgcagtggtaaaatattcgtcactattgcacctgatcatttt
gggcctatcacagctgaacatgaccctactcgaggtcaaggagttttagtcggggaatgc
tgggaggatcgcatggagtgcaggcagtggggtgcacatctacctcatgttgccggcatt
gcggggcagtctgattatgggtcgcagtctgttgcactttctggcggttacgaagatgac
gaagatcacggcgagtggttcttgtatacaggcagcggtgggagggatttgagtgggaac
aagcgcaccaataaagaacaatcgtttgatcagaaattcgacaagatgaacgaagcatta
cgagttagttgcaaacatggtttccctgtacgcgttgtgaggtctcataaagagaaaagg
tccgcttatgctccagatgcaggtgtaagatacgatggtgtgtacaggatcgagaagtgc
tggcgtaaaaagggaattcagggtcacaaggtgtgtcgttatctgtttgtccgctgtgac
aacgagcccgcaccttggacaagtgatgagcatggagatcgtcccaggcctcttcctgtc
gttgaagagctaagatcggcaactgatgtctttgaaagaaaatcgtcacctgcctgggct
tatacggaaggggtaggatggggatggtcccgggaacctccggcaagcaagaagacctcg
ggcagtggaccaagcgaggcaacccagaaacggaaacagctcagtgttcagcaacggcta
ctaaaagaattcggttgcaatgcttgtcggaaagtactcaatcagccagtctccgtgcct
tgtgggcacaatttttgcaaggggtgcttggattctgtgtttgctggtcaggatacttcg
cgagagcgaaagggtgtttcaggtcgcagtcttagaacgcagaaaatagttaagcgttgt
cccaattgtaaggcagatattactgacttcctcgtttcgccccagatcaataggcagatg
gaagagataatactgaccctccagagtagtgcgaaggatgagcaaggaaacgatgcagtt
gaggatgacgatggaggtgaaggttccataccagaggatgatgactcaacagaagctgag
gcgcaagaggaaacgaaaacagctacagtggaattggccttgcccatcgttgccaatgtt
gaagagtgtcactctgaacccaaggtgtttacacctgagcatccttcagttccttcgaat
gacacacctgaaaacattgcggaatcaaacgacaccggagatcctgccctgtctgcactt
tgtcaggcttttcctgattattctgaagatctactccgtggtatgctggctgatcagggt
ggtgatgtcatggagttgaagacagtacttcttgcgcttcagaaacaacagaaccaagta
caatctcgacagcgaggtaggattaagaagggctgttcttctggaagtgaaatattatca
aatggaggcaacagtgtcgcgaaagatctactcgaagaggcaaatgtcgacggaagtgct
cacagcagcagcgatcaagttgagaatgacgtgctgaatggtaatgggcttaatactgga
gattctacgcaggcggagaaggccaacattcctccgaagagacaacgggaaaatgaaacc
aagtcaaatagccgcaaaaagaatcgtcctcctctggttgaattgccacgtagaatctct
cgaagccgtggatgcaaggagaccaaagtcagtcatgtagatctaacttcagatggtgat
tttcaatag
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