Physcomitrium patens (spreading earthmoss): 112281634
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Entry
112281634 CDS
T01041
Name
(RefSeq) probable E3 ubiquitin-protein ligase XBOS32 isoform X1
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112281634
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112281634
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112281634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
zf-C3HC4_3
GCP5-Mod21_N
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112281634
NCBI-ProteinID:
XP_024374145
LinkDB
All DBs
Position
4:complement(13087615..13093515)
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AA seq
559 aa
AA seq
DB search
MGNSFGCSASGERLVSAARDGDLQEAQALLECNPRLAKYSTFGVRNSPLHFSAMQGHNEI
VTLLLECGVEVNTRNYCGQTALMQACRYGHWEVVQTLLLYRANVNRADYLNGRTALHFAA
VSGHSRCIRLILADFVPSIIHPSNILQPVNCDESAPVKNYPDRSSLARVVNRAADGGITS
LHMAALNCHTECLQLLLDLSANVNAVTIQDGTTIDLIGAGSAPLHYAACGGSIPCCQALI
AKGASRIATNCNGWTPLQVARLLRRHWLEPLLIPDSSIPVQPLPPSRYLALPLSSIMKIA
RDCGWRIVDPAPVDADPCSVCLERRCTVAAEGCGHELCTRCALYLCSTNIIATATSSPPG
AIPCPLCRHGIVSFVKLPTTMSLKDLAKMNLASLTLCTTCTMEIPELNSARALLHKGENR
GGCRVSPLSIHSLRLTCPGFSSLNCPGGFGSNDENSGCTSPAVTCGFARSDSRSEVRTDD
PTTIETLAWPLPSRVSILRTTPVVAANTLPVQPPNNDGVPSTSKPAPQRDYSSPKVTTRR
WLREPFRWSNYASLRSQRN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattcgtttggttgctctgcgtcaggagagcgcttggtatccgcagcacgtgat
ggagatttgcaagaggcacaggctctattggaatgcaatccccgtttggcaaagtattcc
accttcggagtgcgcaattcgccccttcacttctcggcaatgcaagggcacaatgagatt
gtaacattacttctcgaatgcggagtagaagtcaatacgaggaattactgtggacagact
gcattaatgcaggcttgtcgttatgggcactgggaggtggtacaaactttgctactctac
cgagcaaatgtgaacagagcagactatctaaatggtcgcacagctctacatttcgcagca
gtcagtggccactcacggtgcatacgcttgatcttagctgattttgtgcccagtattatc
catccgtcgaacatattgcagccagtgaactgcgatgaatcggcacctgtgaaaaattac
ccagatcgaagttctttggctagggttgtgaacagagccgctgatggaggtattacgtca
cttcatatggctgctctaaattgccacaccgagtgcttacaattgctgttggatctttct
gcaaacgtcaatgcagtaaccattcaagatggcactactattgacttgataggagcaggt
agtgcgccgttgcattatgctgcttgtggaggcagtataccctgctgccaggctcttatt
gcgaaaggggcaagtcgaattgctaccaactgcaacggatggacacctttgcaagtggca
cggttattgcggcggcactggctggagcctctgttgatcccagactcatcaattcctgtc
caacctttaccaccatcgcgctatctcgccctccctctctccagcattatgaaaatagct
agggattgtggctggcgaatcgtagatcctgcgcctgtggacgctgacccatgttctgtc
tgtttggaaagacggtgcactgtggctgcagaaggttgcggacatgaactttgcactcgt
tgtgctctctacctgtgctccaccaacatcattgcaactgcaacctcaagtccaccggga
gccattccctgtcctctttgtagacatggcattgtttcatttgtgaaactcccgactacc
atgtccctcaaggatcttgctaaaatgaacttggcttctcttactctttgtaccacatgc
accatggaaatcccggagctaaattctgcaagagccctcctgcataagggtgaaaaccga
ggtggttgtcgagtttctccgctttccatccactccttaagattgacttgtcctggcttc
tcttctctgaactgtccaggaggtttcggttcaaatgatgagaattccggctgtacatcc
cctgctgtgacatgcggctttgcaaggtcagattctcggtctgaggtccgaactgatgac
cctacaacaattgagactcttgcttggcctttgccttccagggtgtcgatccttagaacc
actccagtggtagcggcaaatactctgcctgtacagccccccaataacgatggtgtgccg
tctacttctaaacctgccccacagagagactactcttccccgaaggtgacgaccaggcgg
tggttaagggaaccatttcgatggagcaactatgctagcttgcggtctcaaaggaattag
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