Physcomitrium patens (spreading earthmoss): 112282559
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Entry
112282559 CDS
T01041
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112282559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112282559
Spliceosome [BR:
ppp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112282559
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
112282559
NCBI-ProteinID:
XP_024376065
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Position
5:18500631..18504590
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AA seq
595 aa
AA seq
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MLAATSDISKATITDATASIRGLHGHSGIHPHHQEKLSTTKDCNYLRHKSAHRKLMLATS
LALASLPVSSDQQRLISFGPRVTGVLFLCLNSSTCSQVSFVTVLDPPSKSAIMATLADSF
LADLEDLSDEEILDEEVAEAAEEAADADEEMAEVPILKFDDLDSVAKLQKSQRFHDIMKK
VDEAMANGTESSSKGLVAEDDPEYQLIVECNALSVDIDNEITIIHNFIRDKYRAKFPELE
SLVLHPIDYSRLVKQIGNEMDLTLVDLEGLLPSATIMVVSVTASTTSGKPLSEENLQKTI
EACDRALALDEAKKKVLEFVESRMGYIAPNLSAVVGSTVAAKLMGVAGGLAALSKMPACN
VQILGAKKKNLAGFSTATALPHTGFVFHTEIVQSTPPPLRMKACRLVAGKSTLAARVDFT
RGDLSAKIGQELREDIRKKIEKWQEPPPPKQPKPLPVPDSDPKKKRGGRRLRKMKERYAL
TDMRKLANRMKFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAAKVAKKFKEKQ
YGSSGATSGLSSSLAFTPVQGIELSNPQAQAGLLGSGTASTYFSETGTFSKIKRI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcggccacctcagacatttcgaaggcaactattacggatgcaacggcttccatc
cggggtcttcatggacattccggcattcatccacaccaccaagaaaagctttcaactacg
aaggattgcaattacttgagacacaagagtgcgcacaggaaattgatgcttgcaacatcc
ctcgctcttgcctcgttgcctgttagctccgaccagcagcgcttgatttcatttggacca
cgtgttactggggttctgtttctgtgccttaattcttcgacttgctcacaggtctccttc
gtgactgttcttgaccctccatcgaagtctgcgatcatggcaacgttagcggactccttt
ttggcagacttggaggatttgtctgatgaggaaattctggatgaggaggttgccgaagcc
gcagaagaggctgccgatgcagatgaagaaatggccgaggttcccatcctcaagttcgat
gatttggatagtgtcgccaaattgcaaaagagtcaacggtttcatgatattatgaagaag
gtggatgaagcaatggcaaatggcacagaaagttcgtccaaaggtttggttgcggaggat
gatccagagtaccagcttattgttgaatgtaacgccctttctgttgatatcgataatgag
atcacaattatccacaatttcattcgagacaagtaccgggccaagtttccggagctggaa
tcgttagtgttgcatcctatcgattattcacgacttgtgaagcaaattggcaacgagatg
gatctcactttggtcgacttagaaggacttctgccttctgctactattatggtcgtatct
gttactgcttctaccactagtggaaagcctctctctgaggagaacctacagaaaaccatt
gaagcttgtgaccgggcacttgctctcgatgaagccaagaagaaagttttagagtttgtg
gaaagtagaatgggttacattgcaccaaatctatcggctgttgttggtagtacagttgct
gcgaagctgatgggtgtggcaggtggccttgctgctctttcaaaaatgccagcttgcaat
gtacagatcctgggtgcaaagaaaaaaaatttggctggattctcaactgcaactgcactt
ccacacacaggtttcgtgtttcacacggagattgtgcaaagtactcctccacctcttcga
atgaaagcgtgtcgtctagttgctggtaagtcaaccttggctgctcgagttgattttaca
agaggtgacctctctgctaaaatcgggcaggagttgcgtgaagatatccgaaagaagatt
gaaaaatggcaagaaccaccccctcccaaacagcccaaacctctcccggtcccagacagc
gatcctaagaaaaagagaggtggccgtcgtcttagaaagatgaaggagagatatgccttg
actgacatgcgcaaacttgcaaatcggatgaaatttggtgtacccgaagagagttcactt
ggggatggattaggagagggttatggaatgcttgggcaggctggcagtggcaagttgcga
gtgtcgatcggtcaaagtaagcttgctgcgaaggttgcgaagaaatttaaggagaaacaa
tacggcagtagtggtgccacatcgggtctttcttctagtcttgcattcacgcctgtccag
ggcattgagctgagtaatcctcaagcacaggcgggtttgctcgggagcgggactgcaagc
acctatttttcagagactggaactttttccaagataaagaggatttaa
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