Physcomitrium patens (spreading earthmoss): 112284685
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Entry
112284685 CDS
T01041
Name
(RefSeq) cyclin-T1-3-like isoform X1
KO
K15188
cyclin T
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112284685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112284685
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
112284685
Brd4/P-TEFb complex
112284685
7SK RNP complex
112284685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
Cyclin_C_2
Motif
Other DBs
NCBI-GeneID:
112284685
NCBI-ProteinID:
XP_024380495
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Position
7:9862948..9869914
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AA seq
787 aa
AA seq
DB search
MAGLLGGADATAQLALAGASTGNGKLEEPDHSSANWYFSRDEIEKQSPSRLDGIDIKKET
YFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKKNDRHMVATICMFLAGKVE
ETPRPLREVIMFSYEIRFKKDPIAVQRIRQKDVYEDQKELVLGGERLLLTTLGFDLNVHH
PYKPLVAAIKKFKVAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNL
PKDGDKVWWQQFEVTPRQLEEVSNQMLELYEQNKSNGPTGSLANDPSPSEMNRGHAPVES
PSTNGHHHHHDHQSPLAKSEVQLKLDETFSQRDDDYVGGRMESSSSLYTPNTVSAYSDPP
SDRPSDARHNVIPDTSGVPALNGRNKQETVVKKETLRANNEYREEAKTNVSRVELNDAGG
RKGNETWNGKEKIKEKASTVSNPENVECFTKTEVKNRKKEFVSLDEVNKDKIKAALEKRR
KARVGSELKPPGVKHEPTNEEELLERELESGVDAAAEAVKFGKERKDRKPLRGEHDFGGG
KEYQSGTIKSRVKEEGEVKGTKVEHDVINLKERVAEGDFAASNRKKIVKEKESYAHERKQ
GKSLERNDHMDVDRDNRAQRDRSPERVEEGEVPSTSSTIRSPPRSAEKRSLSDRSLSPGA
QKRHHGSREQYGNRKDGYKDGRHFPHNRDHYYHHSHHSRYDQHRPDGERERHRGDHKDRD
WSDRDHKKFRTCFQWISIFSPKLPISFEGALPTFMTLKTYWKILMARVDFCLRTLDTRRF
HLFIMCS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttactaggtggcgcagatgctacagcgcaattagccttagcgggcgccagc
actggaaatggaaagctcgaggaacctgatcactcaagcgctaattggtatttcagtcgg
gacgagattgagaaacagtccccttcaaggttggatggaatcgacattaagaaagagacc
tactttcggaagtcttactgcacgtttttgcaagaccttggcatgcgactgaaagtacct
caggtgactattgcaacagccattgtgttttgccatcggtttttccatcgtcaatcgcat
aagaagaatgacagacacatggtcgcaactatatgtatgtttctggctgggaaagtggag
gagactcctcggccgcttcgagaagtcatcatgttctcttacgaaattcggttcaaaaag
gatcctattgctgtgcagcgaatcagacaaaaggatgtatatgaagaccaaaaggagctg
gtattggggggtgagcgattattgctgaccactttgggctttgacctaaatgtacatcat
ccatacaaacccttggtggcagctatcaagaagttcaaagtagctcagaatacattggcg
caggttgcttggaattttgtaaatgatggtcttcgcacatcgttgtgcctgcaattcaag
cctcatcatattgctgcgggagctatcttcttggctgccaagtttttgaaagtgaatctg
cccaaagatggagacaaggtgtggtggcagcagtttgaagtaacccctagacagttggaa
gaagtaagcaatcaaatgctggaattgtatgagcagaacaaatccaatggtccgacaggc
tcccttgccaatgatccaagcccctcagaaatgaatcgtggccatgctcctgtagaatcc
ccttctacaaacggtcatcatcatcatcatgatcatcaaagccctttggcaaaatcagaa
gttcaactaaaattggatgaaacttttagccagcgagatgatgattatgttggtggcagg
atggagtcatcgtcatcattgtacactcctaatacggtaagtgcttacagcgaccctcct
tccgatcgaccttcagatgctaggcataatgtcattccagatacatctggagtgccggct
ttgaacgggagaaacaagcaggagacagtggtaaaaaaggagactctgagagcaaacaat
gaataccgagaggaggcgaaaaccaatgtttctcgagttgagctgaatgatgccggagga
cgaaaaggaaacgagacttggaatggaaaggagaagatcaaagagaaggcaagcacggtc
tcgaatcccgagaatgtggagtgttttactaaaacagaagtgaagaacaggaaaaaagag
tttgtaagtttggatgaagttaataaggacaagattaaagcagcgttagagaaaagaagg
aaagcacgggtagggtccgagttgaaacctccaggtgttaaacatgaaccaacgaatgaa
gaagagctgctggaaagggagcttgagagcggagtggatgctgcagcagaggcggtgaag
tttgggaaagagaggaaggataggaagcccttaagaggcgagcatgactttggaggtggc
aaggaatatcaatcaggtaccataaagtctagggtgaaagaggagggggaggtgaagggt
actaaggttgagcatgatgtgattaatttgaaagaacgagtggccgagggtgattttgct
gcttcaaacaggaagaaaattgtgaaggagaaggaatcatatgcacacgaaaggaagcag
ggaaagtcactggaacgtaatgaccatatggatgtagatagggacaaccgggcgcaaagg
gatcgttctcctgagagggtagaagagggtgaagtgccgagcacaagcagtactattagg
tctccaccacgatcagcagagaagaggtccctctctgaccgtagcttgagtcctggggct
caaaaacgacaccatggaagtcgtgaacagtatgggaatcgaaaggatggctacaaggac
ggaaggcactttccccataaccgggaccactactatcaccattcacatcacagcaggtac
gatcaacatcgtccagatggtgagagggaacgtcaccggggtgatcacaaagatagggac
tggtctgaccgagatcacaagaagttcaggacatgttttcagtggatatcaattttctct
ccgaagttgccaatttcttttgaaggagcattgccaacttttatgaccctaaagacgtat
tggaaaatattaatggctcgagtagatttttgtcttcgaactctggatactagacgattc
cacctttttatcatgtgttcctag
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