Physcomitrium patens (spreading earthmoss): 112289139
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Entry
112289139 CDS
T01041
Name
(RefSeq) high mobility group B protein 6-like
KO
K09273
upstream-binding transcription factor
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112289139
03021 Transcription machinery [BR:
ppp03021
]
112289139
Transcription factors [BR:
ppp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
112289139
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
112289139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112289139
NCBI-ProteinID:
XP_024389870
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All DBs
Position
11:complement(5631378..5636039)
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AA seq
481 aa
AA seq
DB search
MASKARAKRAPKGSEVVSEKENVDVSPVSSKATGKTRGLKESSNLSLEEELEAMTKALKQ
VSLEKERNEAKLREKEELLSAKAAEAERMQILLKSRDEEKKRLEDKLRKLQKVQGFQPSL
NLSVPNPSAPEDKNKKQKKDPKRLKKPKTAFLLWCKDYRQKVCEENPNATFAEISTILGD
KWKNVPEEERKPYEDRYKVEKNVYLKLVGEERRETEALKLFHEEQNKKQAQELLEQYLAY
KKETESGSDKKKKKEKDPLRPKHPISAFFAFSQSRRPALLEENKPVTEIAKILGEEWKSM
SPSKRAPFEEIAAKEKERYSVELETYKKNKAEDLSTLDREAEEKSKLEKAQALKLYKEKE
KLDQAKKMMKHQAKEKRDLAQEKDLAQGKKDQANETKKNKDPNKPKKPLSSYLIFGMEIR
KTLSNDQAGLNFADTNAHISQKWKELSDKEKEVWNVKAAALKKKYDVDMEEYRKTHPETS
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaggcaagagcgaaacgggctccgaagggaagcgaggtggtgtcggaaaaa
gagaatgttgatgtctcgcctgtgtcttcgaaggctactgggaagacgagggggctgaag
gaatccagcaacctttctctcgaagaggaacttgaagccatgacaaaagccttgaagcag
gtctctctcgagaaagagcgcaacgaggctaagctaagagagaaggaggaactgttatct
gccaaagctgctgaggccgagcgcatgcaaatcttgctgaagagcagggatgaagaaaag
aagaggctcgaagacaagctacgaaagcttcagaaagtgcaggggttccagcccagtttg
aatctttcagtgccaaatcctagtgccccagaggacaagaataagaaacagaagaaggat
cctaagcgccttaagaagcccaagactgcttttcttctgtggtgcaaagattatcgtcag
aaggtctgcgaggagaacccgaatgccacttttgcagagatcagtactattttgggagat
aaatggaagaatgtccctgaagaggaacgaaagccatacgaagacagatataaagtggag
aagaacgtctacctgaagttggttggtgaggagaggcgagagacagaggctttgaaactg
tttcatgaggaacaaaacaagaagcaggcccaggaactccttgaacagtaccttgcatac
aagaaggaaactgagagtggtagtgacaagaaaaagaagaaggagaaggatccgttgaga
cccaagcacccaatttccgccttttttgcgttttcccaatctcgccgtccagctctattg
gaagaaaataagcccgtaactgagattgcaaagatactgggagaggaatggaagagcatg
agtccttcaaagcgggccccttttgaggagattgccgctaaggaaaaggagagatattct
gtggagcttgagacttataaaaagaacaaggctgaggacctttcaacgctggaccgggaa
gccgaggagaagtctaagctggagaaagcgcaagctctgaagctttacaaggagaaagaa
aagttggatcaagctaaaaagatgatgaaacatcaggcaaaggaaaagagagaccttgcc
caagagaaggacttagctcagggtaagaaggaccaagccaacgaaacgaaaaagaacaag
gacccaaataaaccaaagaaacctctttcatcgtacttgattttcggcatggagattagg
aagactctctcaaacgatcaagcgggattgaacttcgctgacaccaacgcccacatctcc
cagaagtggaaggaactatctgataaggaaaaggaagtttggaatgtgaaggcagcagcg
ttgaagaagaaatacgacgtggacatggaagagtaccgcaaaactcatcccgagacttct
gtatga
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