Physcomitrium patens (spreading earthmoss): 112292292
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Entry
112292292 CDS
T01041
Name
(RefSeq) GTP-binding nuclear protein Ran1A-like
KO
K07936
GTP-binding nuclear protein Ran
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008
Ribosome biogenesis in eukaryotes
ppp03013
Nucleocytoplasmic transport
ppp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112292292
03008 Ribosome biogenesis in eukaryotes
112292292
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112292292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112292292
03009 Ribosome biogenesis [BR:
ppp03009
]
112292292
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112292292
03036 Chromosome and associated proteins [BR:
ppp03036
]
112292292
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112292292
04031 GTP-binding proteins [BR:
ppp04031
]
112292292
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112292292
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112292292
Pre-60S particles
112292292
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112292292
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112292292
Spindle formation proteins
112292292
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112292292
GTP-binding proteins [BR:
ppp04031
]
Small (monomeric) G-proteins
Ran Family
Ran
112292292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RNA_helicase
GTP_EFTU
Pox_A32
ATPase
AAA_24
AAA_22
Septin
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
112292292
NCBI-ProteinID:
XP_024396389
LinkDB
All DBs
Position
15:8539984..8541852
Genome browser
AA seq
223 aa
AA seq
DB search
MALPGQTTPDNCPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC
GRIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVSENIP
IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPYLYLARKLAGDANLHF
VESPALAPPEVQIDLAAQAQYEAELAKAQSMPLPDDDDDSLDG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacctggtcagactacccccgataactgtcccagttttaagcttgttattgtt
ggagatggagggacggggaagaccacctttgtgaagcgtcacttgactggagagttcgag
aagaagtacgagcctacaattggagttgaggttcatcctttggatttcttcacgaactgt
ggccgcatccggttctactgctgggacactgctggacaggagaagtttggagggctgcgt
gacgggtactacatccacgggcagtgtgctattatcatgtttgacgtgactgcgaggtta
acctacaagaatgtgcccacgtggcatcgagatctgtgcagggttagcgaaaacatcccg
atcgtgctgtgcgggaacaaggttgatgtgaagaatagacaagtgaaggccaaacaagtg
acctttcacaggaagaagaacctgcagtattatgagatctccgcaaagtcgaactataat
ttcgagaagccttacctgtaccttgcgagaaagctagctggtgatgccaatttgcatttc
gtggagtctccagctcttgcacctcctgaagtccagatcgacttagctgcccaggctcag
tatgaagccgagctcgctaaggcgcagtcgatgcctcttcccgatgatgatgacgatagc
ttggacggttag
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