Physcomitrium patens (spreading earthmoss): 112294030
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Entry
112294030 CDS
T01041
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112294030
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppp01009
]
112294030
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112294030
03036 Chromosome and associated proteins [BR:
ppp03036
]
112294030
Protein phosphatases and associated proteins [BR:
ppp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112294030
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112294030
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112294030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
112294030
NCBI-ProteinID:
XP_024399887
LinkDB
All DBs
Position
17:14117921..14123813
Genome browser
AA seq
541 aa
AA seq
DB search
MPVAIDMGILDPNLLQLPQDLPSSSGNLGADKLLDDLFTQWLSLPEAQRMVMTLIQEAHP
EASCGDQGSRIQTSPSSLSIDPPTLMHIKEGCTPPLSPRSLPLSPRSQRRLTGHTISTSP
LSNSDLIRESIPQFYFPKGPPTSKEAYFECLDRVNRIFSGYPNGLPLSAFMPVTKEICKL
PSYFSSVLFQKLDINRTGLVTKERLISDWLDQNMLVADGATRIFTVLKQHDTDYLTQDDF
RPILRELLLTHQGLEFLHDTPEFQDRYAETVIFRIFYHCNKGGNGRLLLREIKRSHLFAT
LQQVDVEEDINKVLNYFSYEHFYVIYCKFWELDSDHDFVIDKDDLLRYGNHALTYRIVER
IFSQVPRRFRSGVEGKMGYEDFVWFILSEEDKSSETSLEYWFKCVDLDCDGVITPNEMHH
FYEEQVHRVECMAQEPVLFEDIVCQMSDMIKPKKDGHLTLRDLKNCKLSGNFFNILFNLN
KFVAFETRDPFLIRMEREDPTLTEWDRFAHAEYIRLAMEEDGEDVFMDGSAEVLDDAFEY
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtggccattgacatgggaattttagaccctaacctcttgcagctcccgcaagac
ttaccctcatcttctggcaatctaggtgctgacaagcttcttgacgatctcttcactcaa
tggctttctcttcccgaagctcaacgcatggtcatgactttgattcaagaagctcatcca
gaagcatcatgtggagatcaaggcagtcgcattcaaacctcgccttcatccttgtcaata
gatcctccgacacttatgcatattaaggaggggtgtactccacccttgtcacctcgcagc
cttccgctttcaccaaggtcacaaaggcggttgactggacataccatctctacctccccc
ttaagcaatagtgatcttattcgagaatcaattcctcagttttattttccaaaaggacca
cctacctcaaaagaagcttactttgaatgtttagatcgtgttaatcgaatattttctggt
tatcccaatggtcttccactttctgcattcatgccggttacgaaggagatttgcaagtta
ccatcatacttttcaagcgttttattccaaaagcttgatatcaacaggactgggctagtt
accaaggaaaggttaataagcgactggcttgatcaaaacatgcttgtagctgatggcgcg
acacgcatctttacagttctgaagcagcatgatacagattatctaacacaggatgatttt
aggcccatattgcgcgagctcttattaacacatcaaggtctggagtttctgcacgataca
cctgagtttcaagatagatatgctgaaacagtgatatttagaatcttctatcactgtaat
aagggtggcaatggacgattgctgcttagagaaatcaagcgaagccatttatttgctacc
ctgcagcaagtggatgttgaagaagacatcaacaaagtgttgaactatttttcatatgaa
catttctatgttatttactgcaagttttgggagttggactcggatcacgactttgtgatt
gacaaggatgacctattgcgatacggtaaccacgcactcacgtatcgtatcgtggagcgt
attttctctcaggttccaaggaggtttagaagcggcgttgaaggaaagatggggtatgag
gacttcgtttggtttatattatcagaagaggacaagtcatcggagaccagcctcgagtat
tggtttaagtgtgtggacctggactgtgatggtgtaatcactccaaatgaaatgcatcat
ttctatgaagagcaggtgcaccgggtggagtgcatggcgcaggagcctgttttgtttgag
gacattgtttgccaaatgtctgatatgattaaacctaagaaggacggtcacttaacactc
cgggatttgaagaactgcaaactatctggaaactttttcaacatactctttaatctcaat
aaattcgtggcatttgaaaccagggatccgtttttgatcagaatggaaagggaagatcct
acattgaccgaatgggaccgatttgcgcatgctgagtacatccgcctggcaatggaggag
gacggtgaggatgttttcatggatggcagtgctgaagtcttggacgatgcctttgaatac
tactaa
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