Paenibacillus polymyxa SQR-21: PPSQR21_000780
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Entry
PPSQR21_000780 CDS
T03178
Symbol
caiC
Name
(GenBank) acyl-CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00061
Fatty acid biosynthesis
ppq00071
Fatty acid degradation
ppq01100
Metabolic pathways
ppq01212
Fatty acid metabolism
ppq02024
Quorum sensing
Module
ppq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PPSQR21_000780 (caiC)
00071 Fatty acid degradation
PPSQR21_000780 (caiC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPSQR21_000780 (caiC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppq01004
]
PPSQR21_000780 (caiC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppq04147
]
PPSQR21_000780 (caiC)
Enzymes [BR:
ppq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PPSQR21_000780 (caiC)
Lipid biosynthesis proteins [BR:
ppq01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
PPSQR21_000780 (caiC)
Exosome [BR:
ppq04147
]
Exosomal proteins
Exosomal proteins of breast milk
PPSQR21_000780 (caiC)
Exosomal proteins of breast cancer cells
PPSQR21_000780 (caiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AHM63807
LinkDB
All DBs
Position
81250..82710
Genome browser
AA seq
486 aa
AA seq
DB search
MLITHTDCRIISPEGIMSRERLERDVTIFSRMLALRGIPEDNRVILKAANSYWFVVSLFS
LCHLAVSVTVVDEQTVIDEVAQIYDEAGACCILTDSDLEVPQALVILIQDLIQEEAVHPH
WVGEPKPEALDFNKWCERPDALILYSSGTTGKPKGIVKAGSAFMENIRHSIHAMNYIPSD
HMLPVVPFSHFYGISLIFSWWLTSCSLIICNPKNLWSVIASITKDRATVVDANPSAFYTL
LRMLSRKPEQLELIKQSPVRMWCVGGSPLTQDLEEKFNNIFGQPLLNGYGLSELGNVTLG
TLECPKGCGKPLPGVDLKILDSTGNHQVDGIVGEVWIRSAGCMEGYLNRPDLTQSVLQDG
WFKTGDLGYLDDGMLYVIGRSGKTVNRMGYMVSPVYIEDRIGSLGYRSCVITLEDEAKGT
LLVAFIESESSQVLPVLRKEMNRVLPSYMFPDLLLPLDHFPLNRNGKVDRLEMERTALEK
AASRKA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattacgcatacggattgccgtattatctcacctgaaggaattatgagcagggaa
cgtctggagcgggatgtgacgatcttctcacggatgttggctctcagaggaattcctgaa
gacaatagagtgattctgaaagcggccaattcctattggtttgttgtttctctgttttcc
ctgtgtcatctcgcagtttcggtaactgtggtggacgagcagacggtaattgatgaggtg
gcccaaatctatgatgaagcgggtgcctgttgcattctgacggattccgatttagaagtt
cctcaagctctcgttattctgattcaagatctcattcaagaagaagcagtacacccgcat
tgggtgggagagccaaagcccgaagccctcgactttaacaagtggtgcgagagaccggat
gcgctcattctgtattcttcaggtacgacgggaaaacccaagggaatcgtgaaagctggt
tcagcttttatggagaatatcagacattccatacacgctatgaactacataccgtctgac
catatgctccccgtagtgcctttctctcatttttatggaatttcacttatcttctcctgg
tggttaacctcatgttctctcatcatctgcaatccaaaaaacctctggagcgtcattgca
agtattacgaaagaccgggcgacggtcgtagacgctaacccctctgctttttacaccttg
ttgcgtatgctaagccgaaaacccgaacaactggaattgatcaagcaatccccagtccgc
atgtggtgcgtaggcggctctccacttactcaagacctcgaagagaaatttaacaacata
tttggacagcccctgctaaatggttatggcctttctgaactgggcaacgtcacgctgggg
acgctggagtgtccgaaggggtgtggcaaaccattacctggtgtggatttgaaaatactt
gattctactggcaaccatcaggtggacggtatcgtaggcgaagtgtggatacgaagtgcc
ggatgcatggaaggttatctgaatcgtcccgacctgacacaatctgttctccaggatggc
tggtttaagacgggagatctaggctatctggatgacggaatgctgtatgttattggtcgc
agtggtaagacagtcaaccggatgggctacatggtctccccagtctatatcgaggaccgg
attggttcactaggttatcgatcctgtgtgattactttggaggatgaggcaaaagggact
ttgcttgttgcattcatcgaaagtgaatcctcacaggtcttacctgtgctccgcaaagag
atgaatcgggtactcccttcttacatgtttcccgatcttttgcttccgctcgaccatttt
cctttaaatcgcaatggaaaagtagatcgtctggagatggagcgcactgctctagagaaa
gctgcttctcgcaaagcataa
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