Paenibacillus polymyxa SQR-21: PPSQR21_013100
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Entry
PPSQR21_013100 CDS
T03178
Name
(GenBank) hypothetical protein
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00470
D-Amino acid metabolism
ppq00552
Teichoic acid biosynthesis
ppq01100
Metabolic pathways
ppq01503
Cationic antimicrobial peptide (CAMP) resistance
ppq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPSQR21_013100
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
PPSQR21_013100
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPSQR21_013100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PPSQR21_013100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ppq01504
]
PPSQR21_013100
Enzymes [BR:
ppq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
PPSQR21_013100
Antimicrobial resistance genes [BR:
ppq01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
PPSQR21_013100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AHM64964
LinkDB
All DBs
Position
1523827..1524798
Genome browser
AA seq
323 aa
AA seq
DB search
MTIHSLFEKQVVANSDHPAVVSCEKCLTYRELNEKSNQLAKVLVEHNVCTGCIVGIMMER
SVDMLIAVLAVLKSGGAYLAIDPGYPEERIRFMLSDSNVKLLLTQQHLVTPNHPGLSKLV
VTEQLYSNRSTDNLERNVCSSDLAYLIYTSGSTGQPKGTLLEHKGIENLQSIWINKFHIT
SKDRIGQFASFSFDASVWEIFMALFNGATLYIIPQEIIHQPLDFESYVSENMITVLTLPP
SYAVYLEVSRISDLRLLITAGSSSSSNLVNQWSKYTTYVNAYGPTEASICASLWVAPSAY
FEGNSVPIGLSLPNTHFLFLMSN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgactatccacagtctatttgaaaagcaagtagtagctaattcagatcatcccgctgtt
gtcagttgtgaaaaatgcctaacttatcgcgaattaaatgaaaaatccaatcaattagct
aaagtactggttgagcataatgtttgtactggttgcattgttggaattatgatggaacgc
tccgtcgatatgctcattgcagtattagcggtccttaaatctggaggagcttatttggca
attgatccaggttaccctgaggagagaattagattcatgctaagtgacagcaatgtgaag
ttgctgcttacacagcagcatttagtaactcctaatcatccaggattaagtaaattagta
gtgactgaacaactgtattccaatcgctcgactgataatttggagcggaatgtttgctca
agcgatctcgcctatttaatctatacctcaggttcaacaggacagcctaaaggaacctta
ttagaacataagggaattgaaaatttgcagtcaatttggataaataagttccatattact
tcaaaagatcgaatcggtcagtttgccagcttttcatttgatgcctctgtatgggagatt
ttcatggcactttttaatggggcaaccttatatattattcctcaggaaataatacatcag
cccctcgattttgaatcttatgtttcagaaaatatgattactgttttaacactgcctcca
agttatgcagtgtacttggaagtttcacgtatttcggatttaaggttgctgataacagca
gggtcgtcatcatcgagtaatttggtaaatcaatggagtaagtatacaacttatgtgaat
gcatacgggcccacggaagcgagcatatgcgcttctttatgggtggctccttcagcatat
tttgaaggtaattcagttcctataggcttgtcattgccgaatacgcattttttatttttg
atgagcaactga
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