Paenibacillus polymyxa SQR-21: PPSQR21_026860
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Entry
PPSQR21_026860 CDS
T03178
Name
(GenBank) DNA topoisomerase
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppq03032
]
PPSQR21_026860
Enzymes [BR:
ppq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PPSQR21_026860
DNA replication proteins [BR:
ppq03032
]
Prokaryotic type
DNA Topoisomerases
PPSQR21_026860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AHM66328
LinkDB
All DBs
Position
complement(3108717..3111071)
Genome browser
AA seq
784 aa
AA seq
DB search
MKTLIIAEKPDMGRTIAAVMEPRAKNNRTYLEGEKYIVTWAIGHLLGLAEPDAYDAKYKR
WNIQDLPIIPEQFKIVPNPKTKDQLKMIGELAKRCNAIVNACDAGREGQYIFALIQQQLK
LRQPVKRLWISDLTAESIATGFERLRDASEFEFLTQAARARSEADWLIGMNASRAFTTRH
NTLLSVGRVQTPVLALIHDREKEIEAFQSQTFYDVWAEFKQDQIKYKGAWQGDRLTNPEE
AEGIAAAVRGKEGKITKYDTKQTKEYPFKLYDLTLLQREANAKYGYSAKKTLDVAQALYE
RHKVISYPRTNSNYVTEQNIDGMHKALRMLGTGPYADLVQQANPNLVHKQNKSVCNPSRV
EDHHAILPTLKRPGTLSKEEQNVYDLVIRRFLSHFFPPAEYKMHTVMTQVDKHLFKTNIK
ELLSLGWKVVLSKADQDKGKKSKTSKKEDEEETDEWTDKKFEIDAGRPVDCVRAEMKEKA
TQPPKSYTEGTLLKAMESAGKQMENEELREVMKDAGLGTPATRAATIERLKKVGYIEMKG
KKILITDKGKMAIDLIRHAGVDLLASPEMTGQWERRLHQISKGEAAQEKFMDNVKRFTLS
IIDKVRQQPPAPANAFGEEARSNRSGGKTNARGVGTSGRATTAKGRDRTASGGGSSAGSA
ALKQASAPISRSSTTKAVRSSSDGQSDTSASQRQALGSCPCSNCGGSIIEGRKGYGCSHF
KQGCGFVIWKEYAGKQITETMLKSLLAKGQTQLLSFKRKDGSTVKARIVLDVPGTGQLSV
REDA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgttgattattgctgagaaaccagatatggggcggacaattgccgctgttatg
gagccgcgtgctaaaaataaccgtacctatttggaaggggagaaatacattgtaacctgg
gcgatcggtcatttgttgggtctggctgaaccggatgcttacgatgctaagtacaaacga
tggaatattcaagatcttccgattatccctgaacaattcaaaatcgtacctaatccgaaa
acaaaagatcagctaaaaatgattggtgagctggccaaacgctgcaatgctatcgtgaat
gcttgtgatgctggacgggaggggcaatatatttttgcgttaattcagcagcagttaaag
ctacgacagccggttaagcgattgtggatctcggacttgacggcggaaagtattgcgact
ggctttgaacgattgcgagatgcctcggagtttgaattcctgactcaagctgcgcgggca
cgaagtgaagcggactggctgattggcatgaacgcctccagagcgttcacaacacgacat
aacaccttgctgtcggtaggacgggtgcagactcccgtgttggcactaattcatgatcga
gaaaaggaaatagaagcatttcagtctcaaaccttctatgacgtatgggctgagttcaaa
caagatcagattaagtacaaaggggcatggcagggtgatcggctgacgaatccggaagaa
gctgaggggatcgctgcggcggtacgcgggaaagagggtaaaattaccaaatatgatacg
aagcagacaaaggagtatccttttaaattatacgatttgacgctgcttcaacgcgaggcg
aatgccaagtacggttattcggctaaaaaaacgctggatgtggcacaagctctttatgag
cgtcacaaggtcatttcctatccgcggaccaactctaattatgtgacagagcagaatata
gacggcatgcataaggcattacggatgctggggacaggcccttatgctgatctggtacaa
caagcaaaccctaatttggtccataaacagaataaatcggtctgcaatccgtctcgtgtt
gaggatcaccatgctattttgccgacgttaaaaaggccgggaacgctaagcaaggaggaa
caaaatgtatatgacctggttattcgtaggtttctgtcgcatttttttccgccagctgaa
tataaaatgcataccgtaatgacgcaggtggacaagcatctgtttaaaactaatattaag
gagcttctgtccttgggatggaaagtggttttgagcaaggctgatcaggataaaggtaaa
aagagcaaaacatccaaaaaagaggatgaagaggaaacggacgagtggacggacaagaag
tttgaaattgatgcagggcgtccggtagattgtgttcgcgctgagatgaaagaaaaggcg
actcagcctcctaaaagctacacggagggcacattgcttaaagcgatggaaagcgcggga
aagcagatggagaatgaggaattacgcgaggttatgaaggatgctggattaggtacacct
gcgacacgggccgccacaattgaacgattaaagaaagtcggctacattgagatgaagggc
aaaaagattctgattacagataagggaaagatggctattgacctgatccgtcatgccggg
gtagatctattagcttcaccggagatgacaggtcaatgggaacgccgtcttcatcaaatt
tccaagggtgaggcagctcaggagaagtttatggataacgttaaaagatttacgttgtcc
atcattgataaggtaaggcagcagccacctgctcccgcaaatgcctttggcgaggaggca
aggagtaatcgctcgggaggaaagacgaacgcccgcggcgtaggtacgagtggacgtgcc
accaccgccaaaggaagagaccgcacagcatcaggaggcggtagcagtgcaggaagtgct
gcgctaaagcaagcatcggcgccaataagtcgcagttcgactacaaaagcagtgcggagc
tcatctgatggacagtcagatacttcagcgagccaaaggcaggcgttaggcagctgcccg
tgctccaattgcggtggaagcattattgaaggccgcaaagggtatgggtgtagccacttt
aagcagggctgtggttttgtcatttggaaggaatatgcgggcaagcagattaccgaaacg
atgctcaaatccctgctcgccaaggggcagacgcaattgttgtcttttaaacgtaaagat
ggatcgaccgtcaaagcgcggattgttctggatgtgccaggaacaggacaacttagcgtt
cgtgaggatgcctga
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