Paenibacillus polymyxa SQR-21: PPSQR21_049530
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Entry
PPSQR21_049530 CDS
T03178
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00500
Starch and sucrose metabolism
ppq01100
Metabolic pathways
ppq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PPSQR21_049530
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
PPSQR21_049530
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_14
CBM_25
Alpha-amylase
Glyco_hydro_42
Cyc-maltodext_C
hDGE_amylase
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
AHM68537
LinkDB
All DBs
Position
5600653..5604243
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AA seq
1196 aa
AA seq
DB search
MTLYRSLWKKGCMLLLSLVLSLTAFIGSPSNTASAAVADDFQASVMGPLAKINDWGSFKK
QLQTLKNNGVYAITTDVWWGYVESAGDNQFDWSYYKTYADAVKEAGLKWVPIISTHKCGG
NVGDDCNIPLPSWLSSKGSADEMQFKDESGYANNEALSPLWSGTGKQYDELYASFAQNFA
GYKSIIPKIYLSGGPSGELRYPSYYPAAGWSYPGRGKFQAYTETAKNAFRTAMNDKYGSL
DKINTAWGTKLTSLSQINPPTDGDGFYTNGGYNSAYGKDFLSWYQSVLEKHLGVIGAAAH
KNFDSVFGVRIGAKISGLHWQMNNPAMPHSTEQAGGYYDYNRLIQKFKDADLDLTFTCLE
MSDSGTAPNYSLPSTLVDTVSSIANAKGVRLNGENALPTGGSGFQKIEEKITKFGYHGFT
LLRINNLVNNDGSPTGELSGFKQYIISKAKPDNNGGTGNKVTIYYKKGFNSPYIHYRPAG
GSWTAAPGVKMQAAEISGYAKITVDIGSASQLEAAFNDGNNNWDSNNTKNYSFSTGTSTY
TPGNSGNAGTITSGAPAGTNPGDGGGTANKVTVYYKKGFNSPYIHYRPAGGNWTAVPGVK
MQDAEISGYAKITVDIGSASHLEAAFNDGNNNWDSNNTKNYLFSTGTSTYTPGSNGAAGT
IRTGAPSGSVLSVVTSTYATDLNEVTGPIQTEKLSGVSLNVSTSTYAPNSNGVEVTAQTE
APSGVFTPMDLGTLSKPTSLSTDWSKQSIYFIMTDRFSNGDPSNDNYGGFNSNNSDQRKW
HGGDFQGIINKLDYIKNMGFTAIWITPVTMQKSEYAYHGYHTYDFYAVDGHLGTMDKLQE
LVRKAHDKNIAVMLDVVVNHTGDFQPGNGFAKAPFDKADWYHHNGDITGGDYNSNNQWKI
ENGDVAGLDDLNHENPATANELKNWIKWLLNETGIDGLRVDTAKHVPKGFLKDFDQAANT
FTMGEIFHGDPAYVGDYTRYLDAALDFPMYYTIKDVFGHDQSMRKIKDRYSDDRYYRDAQ
TNGVFIDNHDVKRFLNDASGKPGANYDKWPQLKAALGFTLTSRGIPIIYQGTEQGYSGGD
DPANRENMNFNANHDLYQYIAKLNYVRNNHPALQNGSQREKWVDDSFYSFQRSKNGDEAI
VFINNSWNSQTRTIGNFDNLSNGTRLTNQLSNDSVQINNGSITVTLAPKEVKVFTK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
ttgaccttgtatcgaagtctatggaaaaaagggtgtatgcttctactaagccttgtgctg
tctctgaccgccttcattggctcaccctctaatacggcgagcgccgcggttgcagatgat
tttcaggcttccgttatgggaccactggcgaaaatcaacgactggggttccttcaaaaag
caactgcaaacgttgaaaaacaatggcgtgtatgccatcactaccgacgtctggtggggc
tatgtagaaagtgcaggagataaccagttcgattggagctactacaaaacctatgcagat
gccgtgaaagaagcgggactgaagtgggttcctattatctctacgcataagtgtggagga
aatgtgggagatgattgcaacatcccactgccaagctggctgtcaagcaagggtagtgca
gatgaaatgcagttcaaggacgaaagcggctatgccaataacgaagccctttccccattg
tggagcgggactggcaaacaatatgacgagttgtatgcctcattcgctcaaaactttgcc
gggtataaaagtatcattcccaaaatttatttaagcggcggtccttccggggaattgcgc
tatccgtcctactacccggcagcgggctggagttacccgggacggggcaagttccaagcc
tatactgaaacagccaaaaatgcattccgtacagctatgaatgacaagtacggatcattg
gacaagattaatactgcttggggcaccaagcttaccagccttagccaaatcaatccaccg
accgacggggatggattttacacgaacggcgggtataattccgcgtatggaaaggatttt
ctgtcgtggtaccaaagtgtgcttgagaagcatctaggtgtcatcggagcagctgcccac
aagaacttcgattctgtgtttggtgtccggattggggccaaaatttccggtctgcactgg
cagatgaacaatcctgccatgccgcacagcacagaacaagcaggtggatattatgattac
aaccgtctcattcagaagttcaaggatgccgatctagacttgacatttacttgcctggag
atgagtgacagtggcacagcaccgaattattcgttgccgtccaccctggttgataccgtt
tcctccatcgcgaatgccaagggtgttcgcctgaatggtgaaaatgcactcccgacaggc
ggcagcggcttccaaaaaatcgaggagaaaatcacgaagttcggttatcacgggtttacg
ttattgcgcatcaacaatctcgtcaacaatgacggctcaccaaccggtgagttgagtgga
tttaaacaatatatcatcagcaaagccaaacctgacaataatggcggtacaggcaacaaa
gtaacgatatactacaaaaaaggcttcaactcgccttacattcactaccgcccggctggc
ggaagctggactgctgcgcctggtgtgaaaatgcaggctgccgaaattagcggctatgct
aaaattaccgtcgatatcggttctgcctcgcaattggaagccgcctttaacgacggcaat
aacaactgggacagcaacaacaccaaaaactactcgttcagtacaggcacttctacctac
acgcctggtaacagcggcaatgcaggaacgattacatcaggcgctccagcgggcacaaat
cccggggatggcggcggtacagctaacaaagtaacggtatactacaaaaaaggcttcaac
tcaccttacattcactaccgtccggctggcggtaactggactgctgtgcctggcgtgaaa
atgcaggacgccgagattagcggctatgctaaaattaccgtcgatatcggttctgcctcc
catttggaagctgcttttaatgacggcaataacaactgggacagcaacaacactaaaaac
taccttttcagcactggcacttctacctacacacccggctctaacggagccgcaggaact
atccgaacaggggcaccttcagggagtgtcctcagcgtagtgacttccacctacgcaacc
gacctcaacgaagttacaggacctatccaaacagaaaaactttcaggtgtatccttaaac
gtaagcacttctacctacgcacccaactctaacggagttgaagtaacagctcaaacggag
gcgccttcgggcgtcttcacccctatggatctgggtaccctctccaagcccacctccctc
agcacagactggagcaaacagagcatttattttatcatgacagatcgtttcagcaacggt
gatccatccaatgataactacggtggcttcaattccaacaacagtgatcagcgcaagtgg
catggtggcgattttcaaggtattattaacaaactcgactacattaaaaatatggggttt
accgcgatctggattaccccagtaacgatgcaaaagagtgaatacgcttaccacggctat
catacgtatgatttttatgcagtagatgggcatctcggaacaatggacaagctccaagag
ctggttcgcaaggcacatgacaagaatattgctgtgatgctggacgtagttgtgaatcac
acaggtgatttccaaccggggaacgggttcgccaaggctccttttgacaaagcagactgg
tatcatcacaatggtgacattacaggcggggactacaactccaacaatcaatggaaaatc
gaaaatggtgacgtggctggactggatgacctaaatcatgaaaaccccgctaccgcaaac
gagcttaaaaactggatcaaatggctgcttaatgagacaggcatcgacggactgcgggtg
gataccgccaagcatgtaccgaagggttttctaaaggattttgaccaagctgccaatacc
ttcaccatgggtgaaattttccatggcgaccctgcttatgtgggcgattacacccggtat
cttgatgctgcactagattttccgatgtattatacaatcaaggacgtgttcggacacgat
caatccatgagaaaaatcaaggatcgctactccgatgatcgttactatcgcgatgctcag
accaacggtgtatttatcgacaatcatgatgtaaaacgtttcctgaatgacgcatctggc
aagccgggtgctaactatgacaaatggccacagctcaaggccgctttgggctttactctg
acatctcgcgggattccaattatctaccaaggcactgagcaaggctatagtggcggagat
gatcccgccaatcgggagaatatgaatttcaacgccaaccatgacctgtatcagtacatc
gctaagctgaactatgtgcgcaacaaccaccctgctctgcaaaacggtagccaaagggaa
aaatgggtggacgactccttttacagtttccagcgctctaaaaatggcgacgaggccatt
gtatttatcaacaactcctggaatagtcaaacccgcacaattggcaacttcgataatctg
tccaacggaacccgcctgactaaccagctgagcaacgactccgttcagattaacaacggc
tcgatcaccgtaactctcgctccaaaggaagttaaagttttcaccaagtaa
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