Photobacterium profundum: PBPRA0972
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Entry
PBPRA0972 CDS
T00173
Symbol
PLU3858
Name
(GenBank) Putative ATP-binding component of a transport system
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppr
Photobacterium profundum
Pathway
ppr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PBPRA0972 (PLU3858)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRA0972 (PLU3858)
Transporters [BR:
ppr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PBPRA0972 (PLU3858)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
nSTAND3
DUF4191
RsgA_GTPase
AAA_23
DUF87
DUF4381
AAA_33
Motif
Other DBs
NCBI-ProteinID:
CAG19383
UniProt:
Q6LTJ3
LinkDB
All DBs
Position
1:1075715..1077493
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AA seq
592 aa
AA seq
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MENKAVNKAVLVRLLQYALNDKKKLSIAIGLLFAGALADVSGPWLIHHFIDNYIAKDNYP
IEAIAMLAAAYIGLMIIGAGLKYAQSIRFNTIAIGVVQTVRKQLFGKVLNQPLSAFDYMP
TGKLISRITNDTESIKDFYVFVIATVLKNVTLISVMLVVMSFLSWRLTVIVLILLPIVIF
IMVIYQRRSADAYRKMRDLLADINASMSESIQGMSLIQLMRQERAFSEQFSSLTNNHLRA
QVGVMKLNGLLLRPLIDLLSGIALISLVALFGVSGVELIGVGVLYAFISYLGRVTEPLIE
MTQQLSLLQQALVASERIFALIDAKQQDYGDDEQAILRGELQCQNISFSYDGEQTVLNNI
NLHLHHRGFLALVGHTGSGKSTLASLMMGFYPASQGQILVDKRPLTHLHKTVFRDGIAMV
QQDPHILSDTVRENIQLGRNVTDAVIWDALDKVGLAEQIRQYSDGLDTLFGSGEANLSAG
QKQLLALARVLVAKPKILILDEATANIDSGTEKKIQLALNVLRKDMSIVVIAHRLSTIMD
ADEIVVLHRGDITERGTHQQLLTEQGHYWQMYQLQQASEHLHQLEEEKIVAI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagccgtcaacaaagccgttttagtgcgtctattacagtatgccttgaac
gataaaaagaaattatccatcgcgattgggcttttgttcgcaggggctctggctgatgta
tcagggccatggttaattcaccattttattgataactatattgcgaaagataattacccg
atagaagccatcgctatgttagctgctgcctatattggtttaatgattattggggctggg
ttgaaatacgctcaatccattcgttttaatacgattgcgattggtgtagtgcagacagta
cgcaaacagctctttggtaaagtacttaatcaaccattatctgcctttgactacatgcct
acgggcaagcttatttcgcgaattaccaatgacactgaatcaattaaagatttttatgtc
tttgttattgctacggtattaaaaaatgtcactctgatcagtgtcatgctggtggtcatg
agtttcttaagttggcgtttaaccgttattgtcttgatcttattacccattgttattttt
atcatggtgatttatcagcgaagaagtgcggatgcttatcggaaaatgcgtgatttgttg
gctgatattaatgcctcgatgagtgaatctattcagggaatgagcttaattcaattgatg
cgccaagaacgtgcgttcagcgaacagttttcatcactgaccaataatcatttacgggca
caagtcggggtgatgaaattaaacggtttgttattgcgcccacttatcgatttgctatcg
ggaatcgccttaatatcattggtcgcattatttggagtgagcggtgttgagttaatcggg
gtcggtgtgctttatgcgtttatcagctacttggggcgggtaacggaaccattaattgaa
atgacgcagcagttatcgttgttacagcaagccttagttgccagtgagcgtatttttgcc
ctgatcgatgcaaagcagcaagactacggtgatgacgaacaagcgatcctgcggggtgaa
ttgcaatgccagaatatcagttttagttacgacggtgaacagactgtcttaaacaatatt
aatttacacctgcatcatcgtggtttcttggcattagttgggcataccggcagtggtaaa
agtacattagcctcgttgatgatgggtttttatcctgcatcacaagggcaaattttggtt
gataagcgtccacttactcacctacataaaaccgtatttcgtgatggtatcgcgatggtg
cagcaagacccgcatattctgagtgacacagtacgggaaaacatccaattagggcgtaat
gttacagacgctgtgatttgggacgctttagacaaagtcgggctggccgagcaaattcga
caatattcagacggtctagatacgttatttggcagtggagaggcgaacctgtcggcgggt
caaaagcagctacttgcattggctcgagtgctggtggcgaaaccgaaaatcttgatttta
gatgaagcgacagcaaacattgattcaggaacagagaagaaaattcagctggcgttaaat
gtattgcgtaaagatatgagtattgtggttatcgctcaccgtttatcaaccattatggat
gcagatgaaattgtggtactgcatcgtggcgatattaccgagcgtggaacgcatcagcag
ctattgacggagcaagggcattattggcagatgtatcaactgcaacaggcgagtgagcat
ttacatcagttagaagaagagaagatagtcgctatttag
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