Photobacterium profundum: PBPRA1964
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Entry
PBPRA1964 CDS
T00173
Name
(GenBank) hypothetical D-alanine-D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00470
D-Amino acid metabolism
ppr00550
Peptidoglycan biosynthesis
ppr01100
Metabolic pathways
ppr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBPRA1964
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PBPRA1964
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PBPRA1964
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppr01011
]
PBPRA1964
Enzymes [BR:
ppr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PBPRA1964
Peptidoglycan biosynthesis and degradation proteins [BR:
ppr01011
]
Precursor biosynthesis
Amino acid ligase
PBPRA1964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
ATPgrasp_ST
RimK
GARS_A
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
CAG20368
UniProt:
Q6LQQ8
LinkDB
All DBs
Position
1:complement(2259608..2260534)
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AA seq
308 aa
AA seq
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MFNIMRIGVLLGGESSERSVSLKSGECVVKAIESLGHEAISIDPKHIDVTLMGFFKLDKV
FIALHGGIGESGHVQALLDLLKIPYTGSGTLASAMSLNKLNSKEIWQSNSLKSADWVTLH
KHAPIEDIKAQLSSVVCPVVVKPISQGCSIGVSKVDNNADLLEAVITAFEYDDDILIESF
IAGREYTCAVLNGKPLPIVQIRSEQFFDYDAKFGSQSATYHCPSDLTSEQERDMQALALN
AYNALGCRGWGRVDTILDESGDVFLIEMNTIPGMTTRSVFPMAAKEAGLSFGQVISSLLD
SAKYDDIC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaatataatgcgtattggtgtattactcgggggcgaatctagcgaaagatctgtc
tccttaaaatcaggtgaatgtgttgtaaaagcgattgagtcgctgggccatgaagctatt
tcaattgatcctaagcacattgatgtcaccctgatgggtttttttaaactggataaagtg
ttcattgcgttacatggtggaataggggaaagcgggcatgttcaggcattgttagatttg
cttaaaattccttataccggcagtggtactttagcctctgcaatgtctttaaataaactc
aatagtaaagaaatttggcaaagtaatagtttaaagagtgctgattgggtaacccttcat
aagcatgcaccgatagaagacattaaagcacagttgtcgagtgttgtttgccctgttgtg
gttaagcctatatctcaaggatgcagcattggtgtgtcaaaggtagacaataatgctgac
cttttagaggcggtgattactgcctttgaatatgacgatgatattttgattgaatccttt
attgctggtcgtgaatatacgtgtgcagtgcttaatggtaaaccattacccattgttcaa
attcggtctgaacagttttttgattatgatgcgaaatttggcagtcagagtgcgacttat
cattgccctagtgatctaacgagcgaacaagaacgcgatatgcaagcattagcgttaaac
gcatataatgcccttggatgtcgtggctggggtcgggtagatactattttggatgaatct
ggcgacgttttcttgattgaaatgaacaccattccaggaatgacaacacgaagtgtattt
ccaatggcagcaaaagaagctgggctaagctttgggcaggttatttcatcgttgctcgat
tctgcaaaatatgacgatatttgttaa
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