Photobacterium profundum: PBPRB0927
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Entry
PBPRB0927 CDS
T00173
Name
(GenBank) putative D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00470
D-Amino acid metabolism
ppr00550
Peptidoglycan biosynthesis
ppr01100
Metabolic pathways
ppr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBPRB0927
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PBPRB0927
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PBPRB0927
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppr01011
]
PBPRB0927
Enzymes [BR:
ppr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PBPRB0927
Peptidoglycan biosynthesis and degradation proteins [BR:
ppr01011
]
Precursor biosynthesis
Amino acid ligase
PBPRB0927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
CAG22799
UniProt:
Q6LIT1
LinkDB
All DBs
Position
2:1068648..1069640
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AA seq
330 aa
AA seq
DB search
MSSIHVLLLCGGGSAEHEVSLVSANYIEQQLKNIEGVSYTRVEMKTEGWFDANNALCQLN
LDRTLQVGDDKTPINYVIPCVHGYPGETGDLQSFLEMAGLPYLGCDAESSTNCFNKITTK
LWFDALNIPNTPYIFLSENDAAAHELAAKAFDDWGKVFVKAASQGSSVGCYSVANKDELA
EAVNNAFTYSNQVLIEKTIKPRELEIAAYQYGDELVISKPGEVACPEDKFYSYEEKYSTD
SHSVTTVEAENLTDEQVELIREYALKAFTQMKLKDLSRIDFFLSEDNEILLNEINTFPGM
TPISMFPKMLEHHGHSFAGFIETAIKTAAK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgatccatgttttattactctgcggcggtggtagtgctgaacacgaagtttct
ctcgtatcagctaattatatcgagcaacaattaaaaaacattgaaggtgtgtcttacacc
cgtgttgaaatgaaaacggaaggttggtttgatgcgaataatgcattgtgccagctaaat
ctcgatcgtacgcttcaagttggcgacgataaaacaccgattaattacgttattccatgt
gttcacggttaccctggtgaaacgggtgatttacaatcattcttagaaatggcaggcctg
ccttatttgggctgtgatgctgaatctagcacgaattgttttaataagatcaccactaaa
ttgtggtttgacgcactaaacataccgaatacgccttatatcttcttaagtgaaaatgac
gcagctgcacacgaattagcggcgaaagcatttgatgactggggcaaggtctttgttaag
gcggcctctcaggggtcatcggtaggttgttacagtgtcgcaaataaagatgagctggca
gaagcggtaaacaatgcgtttacctactctaatcaagtgctgattgaaaaaacaattaag
ccgcgtgaattagaaatcgcagcatatcaatacggtgatgagctggttatctcaaagcct
ggtgaagttgcttgtcctgaagataagttctacagctacgaagagaaatacagtactgat
agccattcagttacaacggtcgaagctgaaaacttaactgatgaacaagttgagttaatt
cgcgaatatgcgcttaaagcttttacccagatgaaattgaaagatctttctcgtattgat
ttcttcctgagtgaagataacgaaatcttactgaatgaaattaatacattcccaggtatg
acgccaatctcaatgttccctaaaatgctagagcatcatgggcatagctttgcagggttt
atcgaaacagcgatcaaaactgctgctaagtaa
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