Pseudomonas protegens CHA0: PFLCHA0_c07810
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Entry
PFLCHA0_c07810 CDS
T02671
Symbol
yafC1
Name
(GenBank) HTH-type transcriptional regulator YafC
Organism
pprc
Pseudomonas protegens CHA0
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGL82575
UniProt:
A0A2C9EG22
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Position
897540..898451
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AA seq
303 aa
AA seq
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MKARSDELQVFVCVIECGSISAAAEQLAQTPSAVSRSLSRLEAKLDTTLINRTTRRMDLT
EEGRYFFEQAKLILDQMDELEERLSSRQRNPSGRLRINAASPFMLHAIVPYVAEFRSLYP
DIQLELNSNDLIIDLLEQSTDIAIRIGVLADSTLHARSLGCSPLHILASPDYLARHGTPQ
SVAELAGHTLLGFTQTETLNHWPLRHVHGDRWQIQPGISASSGETLRHLALEGQGIACLS
HFMTIDDIRAGRLQPVLASFNSGYRQPINAVYYRNSQLALRIQCFLDFIQGKLADYANPE
FQG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcccgatccgacgagttgcaagtcttcgtctgtgtcatcgagtgcggctcgatt
tccgccgccgccgagcagttggcccagaccccttcggcggtcagccgcagcttgtcgcgg
ctggaggccaagctcgacaccacgctgatcaaccgcaccacgcgacgcatggacctgacc
gaggaagggcgctacttcttcgaacaggccaagctgatcctcgatcagatggacgagctc
gaagagcgcctgtcctcgcgccagcgcaacccgtccgggcgcctgcggatcaacgccgca
tcgcccttcatgctgcatgccatcgttccctacgtggccgagttccgcagcctgtacccg
gatatccagctggagctcaacagcaacgacctgatcatcgacctgctggagcagagcacc
gacatcgccatccgcatcggcgtgctggcggattccaccctgcatgcccgctccctgggc
tgcagcccgctgcacatcctcgccagccctgactacctggcccgccacggtacgccgcag
agcgtggccgaactggccgggcacaccctgctgggcttcacccagaccgagaccctcaac
cactggccgctgcgccatgtgcatggcgaccgctggcagatccagccgggcatcagcgcc
tccagtggcgagaccctgcgccacctggcgctggaagggcagggcattgcctgcctgtcg
cacttcatgaccatcgacgacatccgcgccgggcgcctgcaaccggtgctggcctcgttc
aacagcggctatcgccagccgatcaacgccgtgtactaccgcaactcgcaactggccctg
cgcatccagtgcttcctggatttcatccagggcaagctggccgattacgccaaccccgag
ttccagggctga
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