Pseudomonas protegens CHA0: PFLCHA0_c36350
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Entry
PFLCHA0_c36350 CDS
T02671
Symbol
gcvA9
Name
(GenBank) glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c36350 (gcvA9)
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFLCHA0_c36350 (gcvA9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR
HTH_28
HTH_34
HTH_30
MarR_2
HTH_AsnC-type
HTH_IclR
HTH_5
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AGL85402
UniProt:
A0A2C9EP02
LinkDB
All DBs
Position
4072206..4073180
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AA seq
324 aa
AA seq
DB search
MDNPLRLPSLQALQTLVSVAQTHSFTESAARLHLTQSAVSRQIQQLEEHYGVSLFERSSR
RVSLTEQGRDVCTVATQVLRSLGSLQERLAPAPLDRPFRIRIFVSLAVRWLLPRLSGFYA
ANPGLCLSIETVGGATVDPGGDCDAYVLYLPEGLDERPLTPLFDEYLVPVCAPTLSDGQW
PPRSLEELAGHALIHGSTSRQEWTAWLQAQDDQTPHSYKHLLFNLDDLALDAAARGLGVA
MTDLILAQDSIARGSLLIPFGQALKTGGVYALWLRDSGAAHPACETVLNWFQAQAAERDL
PAAQGLAGTIAAALGTPGRQSIPG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggataaccctcttcgactgccctcgttgcaggccctgcagaccctggtcagcgtggcc
cagacccacagcttcaccgagtccgcggcgcgcctgcacctgacccagagcgcggtgagc
cggcagatccagcaactggaggagcactatggggtcagcctgttcgagcgcagcagccga
agggtctcgctgaccgaacaggggcgcgatgtctgcacggtggccacccaagtcctgagg
tccctcggctccctgcaggaacgcctggccccggcgcccctggaccgcccgtttcgcatc
cgcatctttgtctccctggcggtgcgctggttgctgccgcggctcagcggtttctacgcc
gccaaccccgggctgtgcctgtcgatcgagaccgtgggcggggccacggtagaccccggc
ggcgattgcgacgcctatgtgctgtacctgccggaaggcctggacgagcggccgctgacc
ccgctgttcgacgaatacctggtaccggtgtgtgccccaacgctcagtgacgggcaatgg
ccgccgcgctccctggaggaactggccgggcacgcgctgatccacggctctaccagccgc
caggaatggaccgcctggctgcaggcccaggacgaccagacgccccacagctacaagcac
ctgctgttcaacctcgacgacctggccctggacgccgcagcccgggggctgggggtggcc
atgacggacctgatcctggcccaggactcgattgcccggggcagcctgctgatccccttt
ggccaggcgctcaagaccggcggggtctatgccctgtggctacgcgacagcggcgccgcg
catccggcctgcgaaaccgtattgaactggttccaggctcaggcagccgaacgggatctg
cccgcggcacaaggcctggctgggacgattgcagcagcgctgggcacgcctggacggcag
tcgatcccaggctga
DBGET
integrated database retrieval system
