Pseudomonas protegens CHA0: PFLCHA0_c36400
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Entry
PFLCHA0_c36400 CDS
T02671
Symbol
ynfL5
Name
(GenBank) HTH-type transcriptional regulator YnfL
Organism
pprc
Pseudomonas protegens CHA0
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_8
HTH_Tnp_ISL3
HTH_30
HTH_24
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGL85407
UniProt:
A0A2C9EP36
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Position
complement(4078650..4079618)
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AA seq
322 aa
AA seq
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MKVRSAYPGLSRSLLAAGDQFITFELMPIMEIRHFRYFLAVARQRNFTRAAEQLGIAPPT
LSRQIQDMENTLGTRLFLRQQREVSLTEAGATLLLEAEATVRQFEFAQRNAQRAGRGEIG
HIELGYVASAVYCGLLQTQVQGFGRDCPDVSLNVRECPMATLPARIADGRLDVGYIRSPM
TLPEGVEAIRLDAEGFVLALSDESWLCRLPQIASEHLLNETFILPEQISGTLQVAAQGAY
APKLGPQPGGLVAVLALVSLGQGVAVVPESVVGHISLPHVLYRPIGGSSATSWLSLIHRR
FEQAPAVVRYIEQVRREYRGKA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggttcgctcagcttatcccggcctttcgcggtctttgttagctgctggcgaccag
ttcattacctttgagctaatgcccatcatggaaattcgtcactttcgctacttcctggcg
gtggcccggcagcgcaatttcacccgcgccgccgagcaattggggattgccccgcccacc
ctgagccggcagatccaggacatggagaacacccttggcacccggctgttcctgcgccag
caacgcgaagtcagcctgaccgaggccggcgccaccctgctgctggaagccgaggccacg
gtgcgccagttcgagtttgcccagcgcaatgcccagcgtgccgggcgcggcgagatcggc
catatcgaactgggctatgtggcctcggcggtgtattgcgggctgttgcagacacaggtg
cagggctttggccgcgactgcccggacgtcagcctcaacgtgcgggagtgcccgatggcg
acgctgccggcgcggattgccgatggtcgcctggacgtgggctacattcgctcgcccatg
acattgccggaaggggtcgaggccattcgcctggacgccgagggctttgtcctggcgctg
tccgatgaatcctggctgtgccgcctgccgcagatcgcctccgaacacctgctcaatgaa
accttcattcttccggagcagatcagcggcaccttgcaggtggcggcccagggtgcctac
gcccccaagctgggcccccagcccggcggcctggtggcggtactggccctggtgtccctg
gggcagggcgtggcagtggtgccggagtcggtggtgggccacatcagcctgccccatgtg
ctgtaccggccgattggcggcagctcggcgacgtcctggctgtcgctgatccaccggcgt
ttcgagcaggcaccggcggtggtgcgctacatcgagcaggtacggcgcgagtaccgcggc
aaagcctga
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