Pseudomonas protegens CHA0: PFLCHA0_c58450
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Entry
PFLCHA0_c58450 CDS
T02671
Symbol
cmpR1
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c58450 (cmpR1)
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFLCHA0_c58450 (cmpR1)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_24
PBP_like
MarR
HTH_23
HTH_50
HTH_41
MarR_2
HTH_30
SBP_bac_3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGL87573
UniProt:
A0A2C9EV70
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Position
complement(6494208..6495071)
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AA seq
287 aa
AA seq
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MLSAELKAFYMVARLGSITQAAKKLGLSQPTVTTQVRNLESQYAVELFYRGGRRLSLSDE
GARLLPMVKELLQKESDIEFFLRNCGQVQGTLRIAATAPYYILDLVKTFRQRLPQVEVSV
EIGNSQQVLEALEDYRVDVAASSQLLEDSRLVRRVLGSDPLVLAVHRNHPLAALDHVPLN
ALAGHTLLMREPGSTTRSLTEGLLKNANVSFGPLLEIGSRESIREAVLRNIGISIIARQE
VPHDPQLRVLTIENAPQIAEYLYCLKERKNARLPAAFLGLAQEMAPA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagtgccgagctgaaggctttttacatggtcgcccgcctgggcagcattacccag
gcggcgaagaagctcggcctcagccagcccacggtgactacccaggtccgcaacctggag
agccagtacgcggtggagctgttctaccgaggcggtcgccgcctgagcctgagcgatgag
ggcgcgcgcttgctgccgatggtcaaggagctgctgcagaaagagtcggacatcgaattc
ttcctgcgcaactgcgggcaggtgcagggcacgctgcgcatcgccgccaccgcgccgtac
tacatcctcgatctggtgaagactttccgccagcgcctgccccaggtggaggtctcggtg
gaaatcggcaactcccagcaggtcctggaggcgctggaagactaccgggtggatgtggcc
gcttcctcgcaactgctggaggattcgcggttggtccgccgggtgctgggcagcgatccg
ctggtgctggcggtgcatcgcaatcaccccctggcggcgctggatcacgtgcccctcaac
gccctggccgggcatacgctgctgatgcgcgaacccggctccaccacccgcagcctcacc
gaaggtctgctgaagaacgccaacgtcagctttggcccgctgctggagatcggcagccgt
gaatcgatccgcgaggcggtgctgcgcaatatcggcatcagcatcattgcccgccaggaa
gtgccccacgacccgcaactgcgggtactgaccatcgaaaacgcgccgcagatcgccgag
tacctgtattgcctcaaggagcgcaagaacgcgcgcctgcccgccgcctttctcggcctg
gcccaggaaatggctcccgcctga
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