Poeciliopsis prolifica (blackstripe livebearer): 129371206
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Entry
129371206 CDS
T09758
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129371206 (ushbp1)
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129371206 (ushbp1)
BRITE hierarchy
Motif
Pfam:
USHBP1_PDZ-bd
DUF6166
Herpes_gE
Motif
Other DBs
NCBI-GeneID:
129371206
NCBI-ProteinID:
XP_054903652
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MEDSKRSRCNSLDTSSLFNKDVLSHGDFVTFDLEASEPLIGHEPTPAEVAQCEAEVSTLL
SIIADLNKKMGSLKAPSDPGDTRPPRPSRPLVPPDLLSHRLLRSSPETSSASAAASKHPT
TNQGGGGVVWTQLQEVLSSVEDSISFRRTWAAPITASDQNKDTEHLRAAQENWTKATQML
EEMERDFGISCSVGMPKDQNLDSLLDLEKHESVLRNNMQSHNEELQRAPNSIYSLEDEKN
KVLHLAGLHKAWRSDRFSPSYRPPSGAVSPDRPPPSYPGSPLLHRKTSRAATPLSLGGDG
TPLGCVTPSSPCPSPISLESETDRLNRCIERLKARNERLTAALERRKVDSEQISMKLCRL
ESDCSALQMALRYSNECEEAYGELLFLYEAKLQQSPSLQIHSAEPVCDMQQSAQNPEMGT
EELSTSFCTAGVTEETQSHTRQRTPDPADREAILRQQIERLKRERAAICPAKSGTGAEVR
VSSETGQPVGTRWGHMMKDNTKPPESKREKASLFYELISVREEMSDLRALIRLKEKELRC
LEWGLVGQKPQEAAGVFIPENLRDEAEDRKTEQRFGENATKAVTDSEITSSLTRPILKEL
QAVLQREQALKRRLAMVHDSLNSALADGAPHRKDNAEQIARLTQAHSKALSSYRQIRRKY
REQVWRLEQKVAAMMESQHSQSEAAKAAEEGAEWRKEETIL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccaaaagaagcagatgtaacagccttgataccagctccctgtttaacaag
gatgtgctgagccatggtgactttgtgacctttgaccttgaagcctctgagcctctgatt
ggccatgagcccacaccagcagaggtggctcagtgtgaggcagaagtaagcaccctgctc
agcatcatcgccgatctaaacaagaagatggggtcgctaaaggctccgagtgatccagga
gacacgagaccgccgcgtccgtccagacctctggttcctccagaccttctgtctcaccgg
ctgctcagaagcagcccagagaccagctctgcttctgccgccgcatccaaacatccaaca
accaaccaagggggcgggggtgtcgtctggacacaactgcaggaggttttgtcgtcagtg
gaggactcgatcagcttcagaaggacgtgggccgctccaatcacagcctccgaccagaac
aaggatacggaacacctgagagctgctcaggagaactggaccaaagccacacagatgctg
gaggagatggagagagactttgggatctcatgttctgtgggaatgccaaaggaccagaac
ctggacagcttgttggatctggaaaaacacgagtctgttctcaggaacaacatgcagagt
cacaatgaagagctgcagagagctccaaatagcatttactcactggaagatgagaaaaac
aaggtgctccacctggctggtctccacaaggcctggaggtctgacaggttttcaccttct
taccggcctccttcaggagctgtcagccccgaccgaccgcctccttcctaccccggttca
cctttactccacagaaaaacgtccagagctgcgactcctctgtctttgggtggggacggg
actccgctgggctgcgtaaccccgagcagtccctgccccagccccatcagcctggaatca
gagaccgacagactgaacagatgcattgagaggctgaaggcaagaaacgagcgtctgact
gcagctctggagcgaaggaaggtggattcagagcagatcagtatgaaactgtgccgactg
gagtctgactgctctgccctgcagatggctcttagatactccaatgagtgtgaggaggcc
tacggtgagctgctgtttctttatgaagcaaagctgcagcaaagcccctctctgcagata
cactcagcagagccggtgtgcgacatgcagcaatcagctcagaacccggagatgggaact
gaggagttatccacctccttctgcacagctggagtcacagaggaaacccagagtcacacg
aggcagagaactccagatccagcagaccgggaagcaattctccgacaacaaatcgagcga
ctgaagagggaacgggcagccatttgcccagcaaagtcaggtacaggagctgaggtcaga
gtgagctcagaaaccggtcaaccggtcggtaccagatggggccacatgatgaaggacaac
accaaacctccggagagcaagagggagaaagcatcgctgttttatgagctgatctcagtc
agggaggagatgtcagatcttcgagctttaatccgtctgaaggagaaggagctgcgatgt
ctcgaatggggcttagtgggacagaagccgcaggaagcagctggagttttcatcccagaa
aacctcagagacgaggctgaagatcgtaagaccgaacagaggtttggtgagaacgctacc
aaagctgttactgacagtgaaatcacaagttctctgacccgacccattctgaaagagctg
caggcggtcctacagagggaacaagccctgaagaggaggctggccatggtccacgactcg
ctgaactcggctctcgcagacggcgccccccacaggaaggacaacgcagagcagatcgct
cgcctcacacaggcacacagtaaagccttgagttcctacaggcagattcgcaggaagtat
cgggagcaggtgtggcggctggagcagaaggtcgccgccatgatggagagtcaacacagc
cagagtgaagcagccaaagctgcagaggaaggagcagagtggaggaaggaagagacgatt
ttataa
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