Poeciliopsis prolifica (blackstripe livebearer): 129378924
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Entry
129378924 CDS
T09758
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b
KO
K04256
c-opsin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129378924 (tmtopsb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pprl04030
]
129378924 (tmtopsb)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129378924 (tmtopsb)
G protein-coupled receptors [BR:
pprl04030
]
Rhodopsin family
Vision
Opsin
129378924 (tmtopsb)
BRITE hierarchy
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srv
7TM_GPCR_Srw
FA_desaturase
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
129378924
NCBI-ProteinID:
XP_054915407
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MIASNASLSCARCPGEATTEASGAVPGSVPAPSLSPTGHLVVAVCLGCIGTLGFLSNFLV
LALFCRYRALRTPMNLLLVSISVSDLLVSVLGTPFSFAASTQGRWLIGRAGCVWYGFINA
CLGIVSLISLAVLSYERHCTMMTPTMADGRDFRPVLAGICFSWLYSVAWTVPPLLGWSRY
GPEGPGTTCSVDWKTQTPNNISYIISLFTFCLALPFAVIVYSYGKLLFTIRQVRRVSSLV
TRRREQRVLVMVVIMVVCYLVCWLPYGVAALLATFGPRDLLTPAASITPSLLAKLSTVVN
PFIYIFMNKQFHRCFRAFFSCSAPEPGSTLKTFSRPTKTFRSARPERNHQVTAAAPSTAP
PTPISGCSAAEPPSAARPKPKVILVAHYRE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcttccaacgcgagcctgagctgtgcgcggtgtcccggggaagcgacgacggag
gcgagcggagcggttccgggctcagtgccggcgccctccttgagtccgaccgggcacctg
gtggtggcggtgtgcctgggatgcatcggcacgctgggcttcctcagtaacttcctggtg
ctggcgctgttctgccggtaccgggctttgcgcacgcccatgaacctgctgctggtgagc
atctctgtgagcgacctgctggtcagcgtgctggggaccccgttcagcttcgcggccagc
acgcaggggcggtggctgatcggacgcgctggatgcgtttggtacggcttcatcaacgcg
tgtctgggcatcgtctccctgatctccctggccgttctgtcctacgagcgtcactgcacc
atgatgacgcccaccatggcggacggcagggacttccggccggtgctggcagggatctgc
ttctcctggctgtactccgtggcctggacggtgccgccgctgctgggctggagccgctac
ggccccgaggggcccggcaccacctgctctgttgactggaagacccaaactccaaacaac
atctcctacatcatcagccttttcaccttctgccttgccttgccgttcgccgtcatagtc
tactcctacgggaagctgctgttcacaatcagacaggtgcgtagagtgagctcattggtg
acgcggcgcagagagcagcgcgttctggtgatggtcgtcatcatggtggtctgctacctg
gtctgctggctgccgtacggcgtcgccgctctgctcgccaccttcggccccagagacctt
ctgaccccggcggccagcatcacgccgtcgctgctggccaagctttccactgtggtcaac
ccttttatttacatattcatgaacaaacagtttcacagatgtttccgggcctttttttcc
tgctccgctccagaaccgggctccaccttaaagacattttctcggccgaccaagacgttc
cgctccgcgcggccggagaggaaccaccaggtgacggcggccgccccgtccacggcgccg
ccgacgcccatcagcggctgctctgctgcagaacctccgtctgctgcccgacccaaaccc
aaagtgattctggtggctcactacagggaataa
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