Pimephales promelas (fathead minnow): 120459101
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Entry
120459101 CDS
T08155
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120459101 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120459101 (lamb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
120459101
NCBI-ProteinID:
XP_039502976
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
MQIRLETSVFLLLLVAAPVRLQDECVGNSCYPNLGDLMVGRAAQLTASSTCGLYGPQNYC
ILGYLENERKCFTCDSRSPYNLPHNPNSHRIENIITTFRPERKMRWWQSENGVHEVSIQL
DLEAMFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSFPGVSEEPADSI
DDLICDSRYSGAEPSTDGEVVLKALDPSFDIHDPYDSTIQELITLTNLRVNFTRLITLGD
TLLTRRRRNPQEKYYYALYEMVVRGSCFCNGHASQCVPVDGTRGDTFSEPGMVHGRCVCQ
HNTAGYNCELCQDFYHDAPWRPGGKTDSDVCRRCNCHGHSEKCHFDPARFLATGGVSGGV
CDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECDPDGSVDGGVCDPVTGQCVCK
QNVEGERCDRCKFGFYGFNRDDPSGCQLCRCNFMGTIRTDNPCDRTTGRCICEHFAYGPQ
CDQCLPGYWGLGNTVYGCLPCDCDVGGALRPECSSVDGQCECRPNMVGQKCSDPAPGYFL
APLDFYIYEAENAVPLAANSPFIQAPTVLPEPIPERPAKLPLCPLAPKPSPIPNKEPEPQ
TVKPSSSTPYNPQFTLPICEHYFRERGYDFKISNGRVVVYKPEIRKRRRRRQGQRTIPFE
PGSPLQIIPRERVSDRSVTWTGPGFVRVQDGAGLRFTVSNIPATLDYYVVVRYEPESTDD
WTAVLNVFPLGSGDGRCQYDPSNKVFTLSGSGRTATLDLPVCLNNGNKHHLDVTFRNQHR
AGPQTGSYILIDSLGLIPKVDSPPNFCSQSYLSQFQQYRCIELGAQAGEETLSEVCEKHI
GSMSAFIHNGAVACNCHQVGAFSSSCSKFGGLCQCKPNVIGRCCDSCAPVTYGLGPNGCS
SCDCDPSGSTAELCDQTTGQCPCRDGVTGRRCGECYPGYYGFPQCRRCTCNGLADICDPI
TGDCLDCREHSTGQNCERCKDGYVGDPVSGQSCEPCLCPDVDGSGRFFAISCRKDPYSGA
PNCECLPGYTGPRCDSCAPGYYGDLRLPGGRCEECCCNNNIDPRDGESCDAVTGECLRCL
HNTEGPQCQSCKIGYYGNAFAQDCKECSCDRRGTDDTKCPAGSPCFCDQETGECPCRTGV
KGALCNECADGYWNLDGESGCEPCNCDPEHALNYVCDKITGQCFCQPEYGGRKCDECGPN
HFGNPDIQCISCDCNMEGTIFPACDTYTGECLCKPGVTGLFCDDCAPGHDTNFPSCEPCH
ACYHLWEKIVSDVRLDAERIETMMPCPEDFRPPSDLQHLENLLEKLQSLLNMTAQDELKK
LEELFARIRNETETIDPNIIVIDPTTLLNTDIDNIRIEFNQLLKNLREKAKEVPVTDVKA
NDILNKIKKLYDEFTDSVKKVETAKKVQEASRKTRENATLELAKCRIGEMDKLERKVKAL
SVANLNEEVCGAPGDVECEKAKCGGALCGMCGGPACTGSLPISLNASKLADATEKNISAL
RSKLKEDDAKLMNTSKMTNYIKDQAEELMNKINQTKNKYEKEKIDTKNLIEKLKNYLRDE
MVRPEDIEKLANAVLSIQLPKSPNEIKDMIENIKKILANITDFNDDLEHLEKQAKIAENL
KERAKEILNRTEAIDVREIKEALNDTEELHDKIVNDLDEAEENNVVISGKVKETEPKLKN
IEDNLDSTQAKKLLDEIQALKNKTEMNRAQGKEAKDAANAALDSAKDVDKDLEELKEQFE
KLKLNSTNQNVNEEANERLKNITMEAEKLAKYVEDKMKKIEDLEKRILDATAKKEERMKD
LEALQNEADYLKNFIVDKVEKYGLCST
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccgattggagacatcggtgttcctgcttctcttggtagcagctccagtccgc
ctccaggacgaatgtgttgggaattcgtgttatcctaacctcggtgacctcatggtgggc
cgtgccgcccaactcactgcttcttcaacctgtggcctctacggacctcaaaactattgt
atcctgggatacctggagaatgagcgcaagtgcttcacctgtgactccaggagcccctac
aatctcccccacaatcccaacagccaccgcatagagaacatcatcaccaccttccgaccc
gaacgcaagatgaggtggtggcagtctgagaatggtgtgcatgaagtcagcattcagttg
gatctggaagcaatgtttcagtttagtcatttgatattgacattcaagagtttccgacct
gctgccatgttggtcgagaggtcaaaagactttggaagaacctggaaggttttccgttac
ttcgcggaggactgtgccaactcattccccggcgtctctgaggagccagcagacagtatt
gacgacctcatctgtgacagtcgctactctggggcagagccatccaccgatggagaggtg
gtgttaaaagctttggatccaagttttgacatccatgatccatacgactctactatacaa
gaactgatcaccctgactaacctgcgagtaaactttacccgtttgatcaccctgggggac
acgttgctcacgcgacggaggaggaacccacaggagaagtattattatgccctctatgag
atggtcgttcgggggagctgcttctgcaatggccacgccagtcagtgcgttcccgtggac
ggcacacgtggagacaccttcagtgagcctggcatggttcacggtagatgtgtttgccaa
cacaacaccgcagggtacaactgtgagctctgtcaagacttctaccatgacgccccctgg
aggccaggggggaaaacagactcagatgtttgcagaagatgtaactgtcatggccattca
gagaagtgtcactttgacccagcacgctttctggccactggcggggttagtggtggtgtg
tgtgatgactgcagaaataaccgtgtaggatctcagtgtgagttgtgtgggccgtattac
taccaggaccctcaacgctctgtggacgaccccaatgcctgtataccttgtgaatgtgat
cctgatggctcagtggacggtggtgtgtgtgatccagtgactggccagtgtgtgtgtaaa
cagaacgtcgaaggagagcgctgtgaccgctgcaagtttgggttctacgggttcaaccgg
gacgacccaagcggctgtcagttgtgcaggtgtaatttcatgggaacgatacgcacggac
aacccttgtgatcggaccacaggaaggtgtatttgtgagcactttgcttacggcccacag
tgtgaccagtgtctgccaggatactggggtctgggaaacacagtctatggctgcttaccc
tgcgactgtgacgttggaggggccctgagacccgaatgttcctctgtggatggccagtgt
gaatgcaggcctaacatggtgggccagaaatgtagtgatccagcccctggatatttcctg
gctcctcttgatttctatatctacgaggctgagaacgcagtgcctctggcggcaaattct
ccatttattcaggccccaacagtcctcccagaaccgatacctgaacgaccagccaagctc
cctctatgtccccttgctccaaaaccctccccaatacctaataaagaacctgaaccccaa
acggtgaagccatcttcatcgaccccatacaacccccaattcaccctgcccatctgtgag
cactacttcagagagaggggttatgacttcaagatcagtaatggaagggttgtggtgtac
aaacctgagatacggaaaagacgaagacgaagacaaggccagaggacaatcccctttgaa
ccaggctcacccctacagatcatcccgcgagaacgtgtctcagatcggtctgtcacttgg
actggaccaggttttgtgcgagttcaggatggggcaggactcagatttacagtcagcaat
ataccagcaactcttgattactatgtagttgtccgctatgaaccagagtccaccgatgat
tggacagctgttttgaatgttttcccacttggatcaggggatggacgttgtcagtatgac
ccatccaacaaagtgtttactctttcaggctctggaaggacagccactctggatcttcca
gtgtgcctcaacaatggtaacaaacaccatttggacgtcacttttagaaatcagcacaga
gcaggccctcagaccggctcatacatcctgattgactctttgggcctcattcccaaagtg
gactcccccccaaacttctgttcgcagtcatatttatctcagtttcagcaataccgctgt
attgagttgggagcacaggcaggagaggaaaccctctctgaagtatgtgagaagcatatt
ggaagcatgtctgcctttattcacaatggtgcagtggcttgcaactgtcatcaagttggc
gcgttcagctcatcatgcagtaaattcggtggactgtgtcaatgcaaacctaatgttatt
ggccgttgctgtgattcctgtgctcctgtgacgtacgggcttggacccaacggctgctca
tcatgtgactgtgatccatctggctctaccgctgaactgtgtgaccagacgactggccag
tgcccatgtcgagatggagtaactggccgtcgttgtggtgaatgttaccctggttactat
gggtttccgcagtgcagacgatgcacatgcaacgggttggctgacatatgtgaccccatc
actggagactgtttggactgcagggaacactccacgggacaaaactgtgaaaggtgtaaa
gatggttatgttggtgaccctgtgtctgggcagtcatgtgagccatgcttatgtcctgat
gtggatggaagtggacgtttctttgccatttcctgcaggaaggatccatactctggagcc
ccaaactgtgaatgcctgcctggatatacaggcccacgctgtgactcctgcgctcctggt
tattacggtgacctgaggttgccgggtggccgatgcgaggagtgctgttgcaacaataac
attgatccccgagatggggagtcatgtgatgctgtgactggcgagtgtttgcgctgctta
cacaacacggaagggccgcaatgtcagagctgcaaaattggatactatggcaatgcattc
gctcaagactgcaaagagtgttcttgtgaccggagaggcacagatgacacaaagtgtcca
gctggaagcccctgtttctgtgaccaggaaaccggcgagtgcccatgtcgaacaggtgtg
aaaggagccctttgtaatgagtgtgcggatggatactggaacctggatggcgagtctggg
tgcgagccctgcaactgtgacccagaacatgctctcaactatgtctgtgacaagatcaca
ggccagtgtttctgccagccagagtatggaggcagaaaatgtgacgagtgtggcccgaat
cactttggaaacccagatatacagtgcatatcttgtgactgtaacatggagggcaccatt
tttccagcttgtgacacttacacgggtgagtgtttgtgtaagccaggggtgacgggcctt
ttctgtgatgactgtgccccgggtcacgacaccaacttcccttcctgtgaaccctgccat
gcctgctatcacctctgggagaaaatcgtctcagacgttagactagatgctgagaggatt
gaaactatgatgccttgccctgaagacttccggcctccatctgatctacaacacttagag
aatttgttggagaagttgcagagcctccttaacatgaccgctcaggatgagcttaaaaaa
ctagaagagctcttcgcacgcattaggaatgaaacggagaccattgacccaaacataatc
gttattgatccaaccacacttctcaacactgacatcgacaacatccgcattgagtttaat
cagctgttgaagaatctcagagagaaggcaaaagaggtcccagtgacagacgtaaaggct
aatgatattttgaataagattaaaaagctctacgacgaattcaccgacagcgtgaagaaa
gtggaaacggctaaaaaggtccaagaagcctccaggaagacaagagagaatgccacattg
gagcttgctaagtgtcgtataggagaaatggataagctggaaaggaaagtgaaagctctg
agcgttgccaacctcaacgaggaggtctgtggggctccaggtgatgtagaatgtgagaaa
gcaaaatgtggtggagctttgtgtgggatgtgcgggggaccggcctgtacagggagttta
cccatcagcctcaatgcctccaaactggcagatgcgaccgagaagaacatctctgctctg
cgcagtaaactcaaagaagatgatgctaagctcatgaacacctcaaaaatgactaattac
atcaaagatcaagcagaggagctgatgaataaaattaatcagactaagaacaaatatgag
aaggaaaagattgacaccaagaacctcatagagaagctcaagaactacctaagagatgag
atggtgaggccagaagacattgagaaactggccaatgctgtgttgtccattcagctgccc
aagtcacctaatgagatcaaggacatgattgagaacatcaagaagattctggcaaacatc
acagacttcaacgatgatctagagcacttagaaaaacaagccaaaattgcagaaaacctg
aaggagagggccaaagaaatcttgaacagaaccgaggcaattgatgtgagggagataaag
gaagcactgaatgatacagaagagctccacgacaagatagtcaatgatctggatgaggct
gaagaaaacaacgttgttatcagtggcaaagttaaagagactgaacctaaactgaaaaac
attgaggataatttggattcgactcaagccaaaaagttactggatgaaatccaggccttg
aagaataagacagagatgaacagagcccaggggaaggaggccaaagatgctgccaatgca
gctctcgacagtgccaaagatgtcgacaaagatcttgaggaactgaaagagcagtttgaa
aaattaaaactgaatagcacaaaccagaatgttaatgaagaggctaatgaacgtctaaag
aacatcacaatggaggcagagaagctggctaaatatgtggaagataaaatgaagaaaatt
gaagacttggagaaaaggattctggatgcaactgcaaaaaaagaggaaaggatgaaagat
ttggaggcactccagaacgaggcagattatttgaagaactttattgttgataaagtggaa
aaatatggtctgtgctccacttaa
DBGET
integrated database retrieval system