KEGG   Pimephales promelas (fathead minnow): 120459101
Entry
120459101         CDS       T08155                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04510  Focal adhesion
pprm04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120459101 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120459101 (lamb4)
SSDB
Motif
Pfam: Laminin_EGF Laminin_N LAMININ_IV_B F5_F8_type_C
Other DBs
NCBI-GeneID: 120459101
NCBI-ProteinID: XP_039502976
LinkDB
Position
Unknown
AA seq 1827 aa
MQIRLETSVFLLLLVAAPVRLQDECVGNSCYPNLGDLMVGRAAQLTASSTCGLYGPQNYC
ILGYLENERKCFTCDSRSPYNLPHNPNSHRIENIITTFRPERKMRWWQSENGVHEVSIQL
DLEAMFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSFPGVSEEPADSI
DDLICDSRYSGAEPSTDGEVVLKALDPSFDIHDPYDSTIQELITLTNLRVNFTRLITLGD
TLLTRRRRNPQEKYYYALYEMVVRGSCFCNGHASQCVPVDGTRGDTFSEPGMVHGRCVCQ
HNTAGYNCELCQDFYHDAPWRPGGKTDSDVCRRCNCHGHSEKCHFDPARFLATGGVSGGV
CDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECDPDGSVDGGVCDPVTGQCVCK
QNVEGERCDRCKFGFYGFNRDDPSGCQLCRCNFMGTIRTDNPCDRTTGRCICEHFAYGPQ
CDQCLPGYWGLGNTVYGCLPCDCDVGGALRPECSSVDGQCECRPNMVGQKCSDPAPGYFL
APLDFYIYEAENAVPLAANSPFIQAPTVLPEPIPERPAKLPLCPLAPKPSPIPNKEPEPQ
TVKPSSSTPYNPQFTLPICEHYFRERGYDFKISNGRVVVYKPEIRKRRRRRQGQRTIPFE
PGSPLQIIPRERVSDRSVTWTGPGFVRVQDGAGLRFTVSNIPATLDYYVVVRYEPESTDD
WTAVLNVFPLGSGDGRCQYDPSNKVFTLSGSGRTATLDLPVCLNNGNKHHLDVTFRNQHR
AGPQTGSYILIDSLGLIPKVDSPPNFCSQSYLSQFQQYRCIELGAQAGEETLSEVCEKHI
GSMSAFIHNGAVACNCHQVGAFSSSCSKFGGLCQCKPNVIGRCCDSCAPVTYGLGPNGCS
SCDCDPSGSTAELCDQTTGQCPCRDGVTGRRCGECYPGYYGFPQCRRCTCNGLADICDPI
TGDCLDCREHSTGQNCERCKDGYVGDPVSGQSCEPCLCPDVDGSGRFFAISCRKDPYSGA
PNCECLPGYTGPRCDSCAPGYYGDLRLPGGRCEECCCNNNIDPRDGESCDAVTGECLRCL
HNTEGPQCQSCKIGYYGNAFAQDCKECSCDRRGTDDTKCPAGSPCFCDQETGECPCRTGV
KGALCNECADGYWNLDGESGCEPCNCDPEHALNYVCDKITGQCFCQPEYGGRKCDECGPN
HFGNPDIQCISCDCNMEGTIFPACDTYTGECLCKPGVTGLFCDDCAPGHDTNFPSCEPCH
ACYHLWEKIVSDVRLDAERIETMMPCPEDFRPPSDLQHLENLLEKLQSLLNMTAQDELKK
LEELFARIRNETETIDPNIIVIDPTTLLNTDIDNIRIEFNQLLKNLREKAKEVPVTDVKA
NDILNKIKKLYDEFTDSVKKVETAKKVQEASRKTRENATLELAKCRIGEMDKLERKVKAL
SVANLNEEVCGAPGDVECEKAKCGGALCGMCGGPACTGSLPISLNASKLADATEKNISAL
RSKLKEDDAKLMNTSKMTNYIKDQAEELMNKINQTKNKYEKEKIDTKNLIEKLKNYLRDE
MVRPEDIEKLANAVLSIQLPKSPNEIKDMIENIKKILANITDFNDDLEHLEKQAKIAENL
KERAKEILNRTEAIDVREIKEALNDTEELHDKIVNDLDEAEENNVVISGKVKETEPKLKN
IEDNLDSTQAKKLLDEIQALKNKTEMNRAQGKEAKDAANAALDSAKDVDKDLEELKEQFE
KLKLNSTNQNVNEEANERLKNITMEAEKLAKYVEDKMKKIEDLEKRILDATAKKEERMKD
LEALQNEADYLKNFIVDKVEKYGLCST
NT seq 5484 nt   +upstreamnt  +downstreamnt
atgcagatccgattggagacatcggtgttcctgcttctcttggtagcagctccagtccgc
ctccaggacgaatgtgttgggaattcgtgttatcctaacctcggtgacctcatggtgggc
cgtgccgcccaactcactgcttcttcaacctgtggcctctacggacctcaaaactattgt
atcctgggatacctggagaatgagcgcaagtgcttcacctgtgactccaggagcccctac
aatctcccccacaatcccaacagccaccgcatagagaacatcatcaccaccttccgaccc
gaacgcaagatgaggtggtggcagtctgagaatggtgtgcatgaagtcagcattcagttg
gatctggaagcaatgtttcagtttagtcatttgatattgacattcaagagtttccgacct
gctgccatgttggtcgagaggtcaaaagactttggaagaacctggaaggttttccgttac
ttcgcggaggactgtgccaactcattccccggcgtctctgaggagccagcagacagtatt
gacgacctcatctgtgacagtcgctactctggggcagagccatccaccgatggagaggtg
gtgttaaaagctttggatccaagttttgacatccatgatccatacgactctactatacaa
gaactgatcaccctgactaacctgcgagtaaactttacccgtttgatcaccctgggggac
acgttgctcacgcgacggaggaggaacccacaggagaagtattattatgccctctatgag
atggtcgttcgggggagctgcttctgcaatggccacgccagtcagtgcgttcccgtggac
ggcacacgtggagacaccttcagtgagcctggcatggttcacggtagatgtgtttgccaa
cacaacaccgcagggtacaactgtgagctctgtcaagacttctaccatgacgccccctgg
aggccaggggggaaaacagactcagatgtttgcagaagatgtaactgtcatggccattca
gagaagtgtcactttgacccagcacgctttctggccactggcggggttagtggtggtgtg
tgtgatgactgcagaaataaccgtgtaggatctcagtgtgagttgtgtgggccgtattac
taccaggaccctcaacgctctgtggacgaccccaatgcctgtataccttgtgaatgtgat
cctgatggctcagtggacggtggtgtgtgtgatccagtgactggccagtgtgtgtgtaaa
cagaacgtcgaaggagagcgctgtgaccgctgcaagtttgggttctacgggttcaaccgg
gacgacccaagcggctgtcagttgtgcaggtgtaatttcatgggaacgatacgcacggac
aacccttgtgatcggaccacaggaaggtgtatttgtgagcactttgcttacggcccacag
tgtgaccagtgtctgccaggatactggggtctgggaaacacagtctatggctgcttaccc
tgcgactgtgacgttggaggggccctgagacccgaatgttcctctgtggatggccagtgt
gaatgcaggcctaacatggtgggccagaaatgtagtgatccagcccctggatatttcctg
gctcctcttgatttctatatctacgaggctgagaacgcagtgcctctggcggcaaattct
ccatttattcaggccccaacagtcctcccagaaccgatacctgaacgaccagccaagctc
cctctatgtccccttgctccaaaaccctccccaatacctaataaagaacctgaaccccaa
acggtgaagccatcttcatcgaccccatacaacccccaattcaccctgcccatctgtgag
cactacttcagagagaggggttatgacttcaagatcagtaatggaagggttgtggtgtac
aaacctgagatacggaaaagacgaagacgaagacaaggccagaggacaatcccctttgaa
ccaggctcacccctacagatcatcccgcgagaacgtgtctcagatcggtctgtcacttgg
actggaccaggttttgtgcgagttcaggatggggcaggactcagatttacagtcagcaat
ataccagcaactcttgattactatgtagttgtccgctatgaaccagagtccaccgatgat
tggacagctgttttgaatgttttcccacttggatcaggggatggacgttgtcagtatgac
ccatccaacaaagtgtttactctttcaggctctggaaggacagccactctggatcttcca
gtgtgcctcaacaatggtaacaaacaccatttggacgtcacttttagaaatcagcacaga
gcaggccctcagaccggctcatacatcctgattgactctttgggcctcattcccaaagtg
gactcccccccaaacttctgttcgcagtcatatttatctcagtttcagcaataccgctgt
attgagttgggagcacaggcaggagaggaaaccctctctgaagtatgtgagaagcatatt
ggaagcatgtctgcctttattcacaatggtgcagtggcttgcaactgtcatcaagttggc
gcgttcagctcatcatgcagtaaattcggtggactgtgtcaatgcaaacctaatgttatt
ggccgttgctgtgattcctgtgctcctgtgacgtacgggcttggacccaacggctgctca
tcatgtgactgtgatccatctggctctaccgctgaactgtgtgaccagacgactggccag
tgcccatgtcgagatggagtaactggccgtcgttgtggtgaatgttaccctggttactat
gggtttccgcagtgcagacgatgcacatgcaacgggttggctgacatatgtgaccccatc
actggagactgtttggactgcagggaacactccacgggacaaaactgtgaaaggtgtaaa
gatggttatgttggtgaccctgtgtctgggcagtcatgtgagccatgcttatgtcctgat
gtggatggaagtggacgtttctttgccatttcctgcaggaaggatccatactctggagcc
ccaaactgtgaatgcctgcctggatatacaggcccacgctgtgactcctgcgctcctggt
tattacggtgacctgaggttgccgggtggccgatgcgaggagtgctgttgcaacaataac
attgatccccgagatggggagtcatgtgatgctgtgactggcgagtgtttgcgctgctta
cacaacacggaagggccgcaatgtcagagctgcaaaattggatactatggcaatgcattc
gctcaagactgcaaagagtgttcttgtgaccggagaggcacagatgacacaaagtgtcca
gctggaagcccctgtttctgtgaccaggaaaccggcgagtgcccatgtcgaacaggtgtg
aaaggagccctttgtaatgagtgtgcggatggatactggaacctggatggcgagtctggg
tgcgagccctgcaactgtgacccagaacatgctctcaactatgtctgtgacaagatcaca
ggccagtgtttctgccagccagagtatggaggcagaaaatgtgacgagtgtggcccgaat
cactttggaaacccagatatacagtgcatatcttgtgactgtaacatggagggcaccatt
tttccagcttgtgacacttacacgggtgagtgtttgtgtaagccaggggtgacgggcctt
ttctgtgatgactgtgccccgggtcacgacaccaacttcccttcctgtgaaccctgccat
gcctgctatcacctctgggagaaaatcgtctcagacgttagactagatgctgagaggatt
gaaactatgatgccttgccctgaagacttccggcctccatctgatctacaacacttagag
aatttgttggagaagttgcagagcctccttaacatgaccgctcaggatgagcttaaaaaa
ctagaagagctcttcgcacgcattaggaatgaaacggagaccattgacccaaacataatc
gttattgatccaaccacacttctcaacactgacatcgacaacatccgcattgagtttaat
cagctgttgaagaatctcagagagaaggcaaaagaggtcccagtgacagacgtaaaggct
aatgatattttgaataagattaaaaagctctacgacgaattcaccgacagcgtgaagaaa
gtggaaacggctaaaaaggtccaagaagcctccaggaagacaagagagaatgccacattg
gagcttgctaagtgtcgtataggagaaatggataagctggaaaggaaagtgaaagctctg
agcgttgccaacctcaacgaggaggtctgtggggctccaggtgatgtagaatgtgagaaa
gcaaaatgtggtggagctttgtgtgggatgtgcgggggaccggcctgtacagggagttta
cccatcagcctcaatgcctccaaactggcagatgcgaccgagaagaacatctctgctctg
cgcagtaaactcaaagaagatgatgctaagctcatgaacacctcaaaaatgactaattac
atcaaagatcaagcagaggagctgatgaataaaattaatcagactaagaacaaatatgag
aaggaaaagattgacaccaagaacctcatagagaagctcaagaactacctaagagatgag
atggtgaggccagaagacattgagaaactggccaatgctgtgttgtccattcagctgccc
aagtcacctaatgagatcaaggacatgattgagaacatcaagaagattctggcaaacatc
acagacttcaacgatgatctagagcacttagaaaaacaagccaaaattgcagaaaacctg
aaggagagggccaaagaaatcttgaacagaaccgaggcaattgatgtgagggagataaag
gaagcactgaatgatacagaagagctccacgacaagatagtcaatgatctggatgaggct
gaagaaaacaacgttgttatcagtggcaaagttaaagagactgaacctaaactgaaaaac
attgaggataatttggattcgactcaagccaaaaagttactggatgaaatccaggccttg
aagaataagacagagatgaacagagcccaggggaaggaggccaaagatgctgccaatgca
gctctcgacagtgccaaagatgtcgacaaagatcttgaggaactgaaagagcagtttgaa
aaattaaaactgaatagcacaaaccagaatgttaatgaagaggctaatgaacgtctaaag
aacatcacaatggaggcagagaagctggctaaatatgtggaagataaaatgaagaaaatt
gaagacttggagaaaaggattctggatgcaactgcaaaaaaagaggaaaggatgaaagat
ttggaggcactccagaacgaggcagattatttgaagaactttattgttgataaagtggaa
aaatatggtctgtgctccacttaa

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