Pimephales promelas (fathead minnow): 120461682
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Entry
120461682 CDS
T08155
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120461682
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
120461682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
120461682
NCBI-ProteinID:
XP_039505846
LinkDB
All DBs
Position
Unknown
AA seq
2520 aa
AA seq
DB search
MRRSRISIKPNVRPGGRGVAPVAEDKSSQKSTAVDDTQQTPLPPQSQLDVRESAVATGDG
HAPGSPSEKASLNTNDGAPSSANTPATTALQRRSRLSATPNLARPKVRSAPPSSTGKTAS
LLSGTKTSSSVQAAFPQSPVPVAISRDDSQNSDATAEANCPPSSPCLPSTSGCPESPSTP
PSQQEPHQTPKKIPNEDFGLQEGTTPAACTLSPCVKLSRVDGPDSPLRNKMSSDKQRVLR
ALKLKELMKLEKRKERTEKKSRRHKQEHCIELDRDKMSLADFIYYLPESNPMTNSSSLST
EETQAQPVASSSPVVLKNIAEADEDNDDDDDADDNMLVPKVRVAEDGSLILDEESLTVRV
QRTSDTIVENANPLFERGSSTTYASFRKNNYVKNWSVRETDMFYLAISMVGTDFSMMAQL
LTHRSRTDIKNKFKKEEKANAWRVDNAFRNKRPFDSEFFSFLLKRILAKDKQKGKSIKLV
VKSTKEKKGKGGKKAKTLEVEDSSNDDDELCSVDSVCFDLEKENQDGCNVNEADVPSSTS
KKRKRTKNTKPKVLSCEKTCKPRKKNKTPKKGKGSVEVDGSSVNADNEDQSCVPVPKKKR
KQSKKSDQEQQEVKRDAKEKCQKKSNKKKLRNEGPTDGEGCAVNEEHNEVSPVPTKKRKR
SKGCVKEEEATKGKRMTKKSKTSKKVPNEEPTDGEAYALNEERNEVSPVPTKKRKRSKEC
AKEEEATKGKRKTKKSKTSKEECTRSELGADGTEVSTAAADAEEDQGEKLSLESTTQEDI
SQSSSKRSKRPLPILAKRKAKKGSVPKATVESKDTVEEPQDESCKEAENEFNIIGLAEKQ
PVVVLERTPPRLKDAHSSPESQGQPQSSQSPLRSPGRQVRAGKVKRNLAVSDAGSEVSTA
GLCAEGSQGERLSLEISLSDHPLQTTSEGERMEQCQTGSDTSPEDMSSTAMPFQVVIQDF
KDMEECCNLHHSELLASSEENGQTLPKSPVVSHEVVERYLGIRAQTAAEESTAARGDHVG
EHTDGLEEQGSKIVTLKESISQEPKMKEADTASISSQQNLSEKRRFIKPTPCLSRAAKTF
HRPLNVQTEFRENTASFNRDSTQLQCSSPEEVQVKIAVNECLSEEDGTCSVTPEENGPWD
VPDNARTTADDLPSAATSPRPSKTEDHEDSSFPEKPQVPDTMPSDKDVNERGTKLEKSGS
QISENKVQIQTDSEASESAVTDTMIEEPQTEGKRIVPVSLFSDGSSVCTQDSFAPEKHIQ
LTKHTSNLELASRVMINPQQTSEPNEDPAEKPEHQSSVKVQHCDLDYDIKRVSREDTLVV
SQVDLQEPKRDEDLRSPVLVLGSIQTAAPDVSVDSTGKGNEGQNDPVLSDASSAPFEADS
PVSSFYDPPHDYTSNMCDMDTMLFSESAAENIQIPDEQDSEKQDGTEEQSEAHEDCIASL
DGNATSEILGSAGVETGATDNPSEEPTFILTLYEIPTSQLFHEADCGQQDMPTYELQPAQ
VQTSSLITGSSQSLSCTLEASSASLHMESEETNTPCKSVSHKVLDDSLVPLSKDAAEDAS
TQLISSQENRCDDVNFLNCPPEMLSCNSAMPTDLPKLDEILTESPETKAATQRSSKIKVK
PKLKPCVVGPSNNGQFDCAPSQTLTSHAIAQAESESNQKTSAQETVSPKIHLSHEDREWG
ANPGHDGVKSTAIVTGSEDMRDESQVHSVLADTSSGKMENVFNKEIPHDSELQKPEDLSV
CLPESARSLSQVNVEKEKMADNSKKPDTCREASSVTPSVSQGRTVPLQRRGRIQVKPKIP
KTTISTKDDFSRREQTDIGSNEPATTRIIFPATLIKEECVKVELGERSEQDVISDIPKES
DTENIEEVTKSKQQTTFTTAETSPCTVSSPEELKIEGGHKDVSHVVLSDTLVPVSMESGS
PVQSSLQMGEESQQVLAAEEDQETHLHEGVSHMLLTDIFIPVCEDMQDDLSKQWMKTGKT
SPHEAERSQMRDPDSADLLGAVSQSSNVGPSISPRSHPPPKGKLLAKMTFPKRTAEDSPK
RGEQSKTVPPPTLMPKQEVDATLNSPETKSSSEPKMESTQCSFETFTCSDLPPVGSEDHE
TTCRGFSHMLLSDISVPVLDESAEHSLHKEALSVGLQEDSVKVEKSAYIERPANTETEET
TASQSVSVEWKTPSCRRSTLRPKPKLSKKRDDPLETDLCQPGSTQTSSATPQQSLDPQAE
EWSLKSNMLPMDSDEIENWCEGVSHMLLSDAFAPVSEEIGQNSTDLKVHEDEEHALSVPN
SEETPPEISDEVHQLDTISDLPKIDESNESLPASKAKKSPARSTFQMTLRSPERRLKDQA
NVLKTAEAAPTTPQRAQTSKVKESMSTPTKQHTGEISGVCRVELKKLSVEEIFPLQSVLQ
PKHHSTPVTVKSIFRGNEMPKVSLALRGSRSPGLEMHADEEPPVPPGYSPKIVLHRVPIT
DANTLASSPARVSTTASQPPADHQFSQNSPPISNLDADKDPVQVSQFFLDDIFTEVVDPD
NT seq
7563 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagatcaagaattagtattaagcctaatgtcaggccagggggtcgaggtgtggcg
ccagttgcagaggacaagagttcccaaaagtccacagctgttgacgacacccagcaaaca
ccgttacctccacagtctcagctggacgtgagagagtctgctgtggcgacaggagatgga
catgccccaggctctccctcagagaaagcatcacttaacactaatgatggagcgccatct
agcgccaacacacctgcaactacagcacttcagaggaggagtagattatctgccacacca
aacctggccagacccaaagtccgctctgctcctccatcatctactggaaagactgcttcc
cttctatcagggactaagacatcatcttctgtccaggcagcctttcctcagtcacccgtc
ccagttgctatcagcagagacgattctcaaaactccgatgccactgcagaggccaactgc
cctccatcctcaccatgtcttccatccacctctggctgtccagaatctccatcaactcca
ccgtctcaacaagagccccaccaaacccctaaaaaaatcccaaatgaagattttgggctc
caagaaggaaccactccagctgcatgcacactctcaccgtgtgtgaagctgtcacgtgtt
gatggaccagactctcccctcaggaacaaaatgtcctcagacaagcagcgggtcttgaga
gccctcaaattgaaagaactgatgaagctggagaagaggaaagaaagaacggagaagaag
agtagacggcataagcaagagcactgtattgagctggatcgtgacaaaatgtccttagct
gacttcatttattacctgccagagtcaaatcctatgacgaacagctcctccctttccaca
gaggagactcaagcacagcctgttgcttcatcgtctcctgttgtgctgaaaaatatagca
gaagcagatgaggacaatgatgatgatgatgatgctgatgacaatatgctggttccaaaa
gtcagggtggcagaggatggctcactgattttagatgaagaaagtttgacagtgcgtgtt
cagaggacgtctgatacaattgttgagaatgcaaatccgctgtttgagcgaggctcttct
acaacatacgcgagtttcaggaaaaataactatgtgaagaactggtctgtcagagagaca
gatatgttctatttggccatcagtatggtgggaacagatttctccatgatggctcagctg
ttgactcaccgtagcagaacagacattaagaataaatttaagaaggaggagaaagcgaat
gcatggcgagtggataatgcgttcagaaacaagcggccatttgatagcgagtttttcagt
ttcctgctgaagaggatcttggctaaagacaaacaaaaaggcaaatccattaaactggtt
gtgaaatccactaaagaaaagaaaggaaaaggtggtaaaaaagccaaaacgcttgaggtt
gaagactccagcaatgatgatgatgaactgtgcagtgtggacagtgtctgttttgattta
gaaaaggaaaaccaggatggctgtaatgtgaatgaagctgatgtgccgtcaagcacaagc
aagaaacgtaaacgcaccaaaaacactaagccaaaagttttgtcatgtgagaaaacatgc
aagccaaggaagaaaaacaagacaccgaaaaaaggcaaaggctcagttgaagtggatgga
agctctgtgaacgcagacaatgaagatcagtcatgtgtgcctgtgccaaaaaagaaacgc
aaacaatcaaaaaagagtgaccaggagcagcaggaagttaaaagagatgccaaagaaaaa
tgccagaaaaagagcaacaaaaaaaaactacggaatgaaggacctactgatggagaaggt
tgcgcagtgaatgaggagcacaatgaggtgtctcccgtcccaaccaaaaaacgcaaacgc
tccaaaggatgtgtgaaggaagaggaagccacaaaaggaaaacggatgactaaaaagagc
aaaacgtcaaagaaagtaccgaatgaagaacctactgacggagaagcttatgcactgaat
gaggagcgcaatgaggtgtctcccgtcccaactaaaaaacgcaaacgctccaaagagtgt
gcaaaggaagaggaagccacaaaaggaaaacggaagactaaaaagagcaaaacgtcaaag
gaagagtgtactagatctgagctgggagctgatggtactgaagtctcgacagcagccgcc
gatgctgaagaggatcaaggggagaagctcagtcttgagagcacaactcaggaagacatt
tcacaaagctcttccaaacgctcaaagaggcctttgcccattttggcaaaaagaaaagcc
aaaaaagggtctgtgccaaaagcaaccgtagagagtaaagacacggtagaagaacctcaa
gatgaaagctgcaaagaagctgagaatgagttcaacatcatcggtcttgctgagaaacag
ccagtagttgttctggagagaactcctccaaggcttaaagatgcacacagctcacctgaa
agccaagggcagccacagtcctctcagagcccactacgttctcctggacgccaggtaaga
gcgggaaaggtgaagcgcaatctggctgtttcagatgctggtagtgaagtctcgacagca
ggcctctgtgctgaagggagtcaaggggagagactcagtctagagatttcattaagcgat
catccgcttcagacaacttcagaaggagaaaggatggagcagtgtcagactgggtcagat
acatcaccagaagacatgagcagcactgccatgccttttcaagtagtcatccaagacttt
aaagacatggaggagtgttgcaatttgcatcattcagagcttttggcttcatctgaagaa
aatggtcagacattaccgaaaagtccagttgtgtctcatgaagtagtggagcgctaccta
gggatccgagcacaaaccgctgcagaggaatcaacggccgccagaggagatcatgtggga
gagcatacagatggtcttgaggaacagggctctaaaatcgttactctaaaagagagcatc
tctcaagaaccaaaaatgaaagaagctgacactgcctccatttcttcccaacaaaaccta
tccgaaaaaaggaggtttattaagccaacaccctgtctaagccgagcagccaagactttc
cacagacctctcaatgtgcaaacagagtttagagaaaatacagcttcttttaaccgtgac
tccacacagctgcagtgtagcagtcctgaggaagtccaagtgaagatcgccgtgaatgaa
tgcctttctgaggaagacggcacatgtagcgttactccagaagaaaatggcccttgggat
gttccggataatgccagaactacagcagatgatctgccgtcagctgcaacttctccaaga
cctagtaagactgaggaccatgaagattcatctttccctgagaagcctcaggttcctgac
accatgccatcagacaaagatgtgaatgaaagaggaacaaagcttgaaaagtctggatct
cagatttctgagaataaagttcaaattcaaactgattcggaggctagtgagtctgctgtc
acagacaccatgattgaggaacctcagacagaggggaagaggattgttccagtcagcttg
ttctctgatggttcctcagtttgtactcaagatagtttcgctccagagaaacacattcag
cttactaagcacacatcaaacctagaattggcatctcgggtcatgatcaaccctcaacag
acctccgagcctaatgaagatcctgctgagaagccagaacatcagagctcagttaaagtc
cagcactgtgatttggattatgacataaagagagtctccagagaggatacgcttgtggta
tctcaggtggatttgcaggaacctaaacgggatgaggatctaaggtctcctgtcttggta
cttggctcaatacaaactgcagccccagatgtttctgtggacagcactggtaaaggaaac
gaaggacaaaatgatccagttctcagcgatgcttcatcagcaccatttgaggcagacagt
ccggtttcatctttttatgatcctccacatgattatacaagcaacatgtgtgatatggac
acgatgctgtttagtgagtctgcagctgaaaacattcaaataccagacgagcaggattca
gaaaagcaagatggcacagaagagcaatcagaagctcatgaggattgcattgcctctctc
gatggaaatgcaacatctgaaatcctaggttcagctggagtggaaacgggtgcaactgat
aacccatcagaggagcccacctttattttgactctatatgagattccaacctctcagctg
ttccatgaggctgactgtggccagcaggatatgcccacttatgaactgcagccagcacaa
gtccagacatcctcactgataacaggcagttcacagtctctttcctgcacattagaggct
tccagtgcatctctgcatatggagtcggaagagaccaatacaccatgtaaaagtgtttct
cacaaggtgctggatgattccctggttcctctttcaaaggatgctgcagaagatgcaagt
acacaattgatatcctcacaggaaaaccgttgtgatgatgtgaactttttaaattgtcca
cctgagatgctctcctgtaattctgccatgccaacagatctaccaaagttggatgagatc
ctgacagaatctccagaaactaaagctgccactcagagaagtagcaagataaaggtcaag
ccgaaactaaagccatgtgtggttgggccttcaaacaatggccagtttgattgtgcaccc
agtcagacactaacgtctcatgctattgcacaagctgagagtgagtccaaccagaaaaca
tctgcacaggaaacagttagtcctaaaatccacttaagccatgaagaccgtgagtgggga
gccaatcctggacatgacggtgtgaaatcaactgccattgtgacaggctctgaagatatg
agagatgagagtcaggtgcacagtgtgttggctgatacctcctcaggaaaaatggaaaat
gtttttaataaggagatccctcatgacagtgagctccaaaaacctgaggacttgtctgta
tgccttccagagagtgcgagatcactgtctcaagtaaatgtcgaaaaggaaaaaatggca
gataattctaaaaagccagatacttgcagagaggcatcaagtgtgacaccatcagtttct
caagggaggactgtgcctttacaaagaagaggcaggatccaagtgaagcctaaaatcccc
aaaacaacaatatctactaaagatgatttctcaagacgggagcaaactgatattggatct
aatgaaccagccacaactcgaatcatttttccagcaactttgattaaagaagaatgtgtt
aaagtggaactgggcgagagatctgagcaagatgttatttctgatattccaaaggagtcg
gacacagaaaacattgaagaagtcacaaagtcaaagcagcagaccacattcacaactgcg
gaaacatcaccatgcactgtatcatcacctgaggaattgaaaatagagggtgggcacaag
gacgtgtcccatgtggtgttgtccgatacattggtgccggtttccatggagagtggaagt
cctgtccaaagcagtctccagatgggtgaagagagccagcaggtcctcgctgctgaggaa
gaccaggagacacatttacatgagggtgtttcacacatgctgctgactgatatattcata
cccgtctgtgaggacatgcaagatgatctgagcaagcaatggatgaaaactggaaagaca
agccctcatgaagcagaaagatctcagatgagggatccagattctgcagacctgttaggt
gcagtgtcgcaatcatcaaatgttggaccatcaatatcacccaggagtcacccaccaccc
aaaggcaagttgttggcaaagatgacatttcccaaaaggacagctgaagattcccctaag
aggggcgagcaatcaaaaaccgtgcctccgccaaccttaatgccaaagcaagaggtcgat
gccactctaaattccccagaaactaaaagcagttcagaacccaaaatggagtcaacacaa
tgtagttttgagacttttacatgttctgacttgccgcctgttggctcagaggaccatgag
acgacgtgcagggggttttctcatatgttgctctctgatatttcggtacctgtattggat
gagtctgcagagcacagccttcacaaagaggccttatcagttggtcttcaagaagattca
gtcaaagttgagaagtcagcatatattgagagaccagcaaatactgaaacggaggagaca
acagcaagtcagtctgtgtcagtggaatggaaaacaccttcttgtaggagaagcacactt
cgcccaaagcctaaattgtcaaaaaagagagatgatcctttagaaaccgacctctgtcag
ccgggctctacacagacctcttcagctactcctcagcagtccctggaccctcaagctgag
gaatggtccctcaaaagcaatatgctgccaatggactcggatgagatagagaactggtgt
gaaggagtttcacacatgttgctgtcagatgcatttgcgcctgtttctgaagagattgga
cagaacagcacagatctaaaagtacatgaggatgaggaacacgctcttagtgtgccaaac
agtgaggagacacctcctgagatttcagatgaagtacatcaattagacactatttctgac
ttgccaaagattgacgaatcaaatgagagtctgccagcatcaaaagctaaaaaatcacca
gcgagaagtacatttcagatgacactaagatcgcctgaaagacgccttaaagatcaagcc
aatgtgctaaagacagccgaagctgccccaaccacacctcagcgagctcagacatcaaaa
gtgaaggaatccatgagtactccaacaaagcaacacacaggagagatctcaggtgtgtgt
agggtagagctaaagaagttatctgtagaggaaatattccctctccaaagtgtcctgcaa
ccaaagcatcacagcacacccgtcactgtgaaatccatttttagagggaatgagatgccc
aaggtatctctggctttgcgtggaagcagaagccctggtttagaaatgcatgctgatgag
gagccacccgtgcctccaggatactcaccaaagattgtccttcatcgtgtaccaataacc
gatgcaaacacgcttgcctcgtccccagctagagtgtccaccacagcctcccaaccaccg
gcagatcatcagttctctcaaaacagccctccaatctccaatttggatgctgataaggat
cctgttcaagtgtcccagttcttcctggatgacatcttcactgaagtcgtggatccggac
tga
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integrated database retrieval system
