Pimephales promelas (fathead minnow): 120467721
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Entry
120467721 CDS
T08155
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1-like
KO
K11757
protein polybromo-1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120467721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120467721
03036 Chromosome and associated proteins [BR:
pprm03036
]
120467721
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120467721
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
120467721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
PilO
Motif
Other DBs
NCBI-GeneID:
120467721
NCBI-ProteinID:
XP_039512110
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFEDSQTTSIPSTSRKRRRTTNIPTVDPIAVCHELYNTIRDY
KDDQGRMLCELFIRAPKRRNQPDYYDVVSQPIDMMKIQQKLKMEEYDDVEQLTADFQLLF
NNAKTYYKPDTPECRAACKLWDLYIRTKNEFVQRGDYDEDDDDDDTQETPGGATEEESVS
SLKEVLGQLLDAVLTYTEHGRLISELFQRLPSKVQYPDYYAIIKEPIDLKIVAHRIQMCY
YKSVNHMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKVFAQRKLELEHAEPVKSSIRIRN
RRFAQGDRLSSITTALQYGSESEEDAMLTGSVHYDEGESEGESLHSSMDVCNPIFQMYEA
VRSGRNSQGQLLAEPFFQLPSRKDLPNYFHQISHPISLQQIRSKMKNNEYESVEQIYTDL
NLMFENAKRYNAPNSQIYKRVLKLQQILQMKRKELTRRDDEDGDSMLSSTLSDGGSIKRK
SHKKNTKKNRMKALYAAVAEAREMGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLRTVD
HNIRSDRYPSEDSMMEDMKLMFRNARHYNEEGSQVYNDANVLEKILREKRRELGPPPDDE
DIVSPKLKIRKSGISPKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRAEL
PDYYVAIKKPIDMEKVKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYKDALVLH
KVLLETRRDLEGGDDAHVPDVARLIQELIRNLFVSVLGHQDDEGRCYSDSLAEIPAVDPN
HSDKTPLNFEIIRANVDKGRYRRLDVFQDHMFEVLEKARRLHRTDSEIFEDSVELQQFFI
RIRDELCKNGEILLTPALGYTTKHLHSDVEKEKKEKLPREYEEDKLKREEEKKEAEKSED
TAGGGWQGVLQRNYSQDCSFKDNMYHVGDYVYVEPTEPNLQPHIVCIERLWQDDAGENWL
YGCWFYRPNETFHLATRKFLEKEVFKSDYFNKIPVNKIMGKCVVMFVKEYFKLQPDSFRP
EDVFVCESRYSAKTKSFKKIKMWTMPLSSVKFVIREVTLPVVRVASMFAPKQDSEKPPEV
LEDGKAVPSIIDKEREDVTLEVSNGEPGCQYYEQLCYNDMWLKVGDCVYIRSHGLVRNRV
GRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEEACPMTCVGGKCTVS
SFKDFLSCRPTEMPEEDVLLCESRYIESEKQMKKFKGLKRFSLSAKVVEDEIYYFRKLIV
PQKEPSPLLDKKIEELEAKFADMTDEELEDLGDDDGDGSDAHCMPQLQTQLTGDMDMLHY
APPQSTPKSIKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
NLEATKKAEYEERAAKVAEQQERERAAQNSPRAGTPVGALMGLVPPPTPMGMLSHSMTPM
AGKGMLGSYRPPMLPFQGPVDGMINMAGMPLHPMGMPALPLHFPWGKPGMPYLGMNGVAA
GSTGSAYGTQMGVMNSGLQAPPPYPGQGQAGTPSLQQPSTPIFVSPPPKPQRLLHSEAYL
RYIEGLSAESTTVSKWDQTLSARRKDVRLTKEQESRLPSHWLKSKGAHKTMADALWRLRD
LMLRDTLNIQQTYNIQNI
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgggctctaagcgacggagagccacgtctccatccagcagtgtgagcggaggagatttc
gaggacagccagacaacatctataccatcaaccagccggaagaggagaagaaccacaaac
atccccactgtcgaccctatcgctgtgtgtcatgagctgtacaacactatcagagactat
aaggatgatcagggcaggatgctgtgtgaactcttcatcagagcaccaaagagaaggaac
cagccggattactatgatgtggtgtcgcagcccatcgacatgatgaagatccagcagaag
ctgaagatggaggagtatgatgatgttgagcagctcacagccgactttcagctcctattc
aacaacgccaagacctactacaaaccagacactccggagtgcagagcggcttgcaaactc
tgggatctgtacattcgcaccaaaaacgagtttgtgcagcgaggagactacgatgaagat
gatgacgatgacgacacacaggaaacccctggaggggccaccgaggaggagtctgtctca
agccttaaggaagttctaggccagcttctggatgctgtgctgacgtacacagaacatggg
cgtctcatcagcgaacttttccagagacttccctctaaagtgcaatatccagattattat
gctattattaaagaaccaatagatctgaagatcgttgcacaccgaatacagatgtgctac
tataaaagtgtaaaccatatggctaaagacattgacttgttagtcaaaaatgccaaaacc
tacaatgaacccggatcacaagtgtttaaagatgcaaacaccatcaaaaaggtctttgcg
cagagaaaactggagctcgaacatgcagaaccggttaaaagtagcatcaggatcaggaac
agaaggtttgcacaaggagacagactctcctccatcaccactgctctacagtacggctca
gagagtgaagaggatgccatgctaactggctctgttcattacgatgaaggcgagtcagag
ggcgagagcctgcactccagcatggacgtgtgcaaccccatcttccagatgtatgaggcc
gtgcggagcggcagaaacagccagggacagctcctagccgagcccttctttcagctgccc
tccaggaaagacctgcccaactacttccatcagatcagccatccgatctccctccagcag
ataaggagtaagatgaagaacaatgagtatgaaagtgtggaacagatatatacagacctc
aacctgatgtttgagaacgcgaaacgctacaacgctcccaactctcaaatctacaagcgc
gtgctgaagttgcagcagatattgcagatgaagaggaaggaactgacgaggagagatgat
gaagatggtgacagtatgctctcatccacgctctctgacggtggcagcatcaagcgcaaa
agccataagaagaacacaaagaaaaaccgcatgaaggctctgtacgctgccgtggccgag
gctcgggagatgggcacaggacggagactctgcgacctcttcatggtcaagccgtcaaaa
aaagactacccagactattacaagatcatactggaaccaatggacctgaggaccgtcgac
cacaacatccgctctgacagataccccagtgaggactccatgatggaggacatgaagctg
atgttccgtaatgcgcgtcactacaatgaagaaggctctcaagtttacaatgacgccaac
gttctggagaagatattaagagaaaaacgaagggaacttggaccaccgccggatgacgag
gatatcgtttcacccaagctgaaaattaggaagagtggcatctctcctaaaaagtccaag
tacctgacccctctccaacagaaactcaacgagctctacgaggcggtgaagaactacact
gacaagcgtggacggcgcctcagcaccatcttcctccgcctcccgtcccgcgctgagctt
ccagactactatgtggccatcaagaaacccatagacatggagaaggtcaagagccacatg
ctggccaacaagtaccaggatgttgacgctctggtggaagacttagtcttgatgttcaac
aacgcctgcacttataacgaacctgaatcgctgatctacaaagatgcattggtgcttcac
aaagtgcttttggagacgcggagagacttggagggcggcgacgacgcgcatgtcccagat
gttgcacggctcatccaggagctcatccgcaatctcttcgtctcggtgcttggccaccag
gatgatgaggggcgctgctacagcgactccctggcggagatcccggcggtcgatccgaac
cactccgataagactccactgaactttgagatcatcagagccaacgtggacaagggccgt
tacaggaggctagatgtcttccaggaccatatgtttgaagttttggagaaagccaggcgt
ctgcacaggacggactctgagatcttcgaggactccgtggagctccagcagttcttcatc
cggatcagagatgagctgtgtaagaacggagagattctgctgacgcccgccctcggttac
accaccaaacacctgcacagcgacgtggagaaagagaagaaagagaagctgccgagagaa
tacgaagaggataaactcaagagagaagaagagaaaaaagaggctgagaagagcgaggac
acagccggtggcggatggcagggagtccttcagcgcaactacagccaggactgcagcttc
aaggacaacatgtaccatgtgggagactacgtctatgtagagcccacagaaccgaacctg
cagccgcacatcgtctgcatagagcgcctgtggcaggatgatgccggagagaactggctt
tatggctgctggttctacagacccaacgaaacatttcacctcgcaacacgcaaatttctg
gagaaagaagttttcaaaagcgactatttcaacaaaattcctgtcaataaaataatgggc
aaatgtgtcgtcatgtttgtgaaggagtatttcaagcttcagcctgacagcttccgacct
gaagacgtttttgtctgcgagtctcgttattctgccaagaccaagtccttcaaaaagatc
aagatgtggacgatgcccctgagctcggtgaagttcgtcattcgtgaagtgaccttgcct
gtggtccgggtggcctccatgtttgcacccaaacaggacagtgaaaagcctcctgaggtg
ctagaggatgggaaagctgtaccatctatcatcgataaggagagggaggatgtgaccctg
gaggtcagtaacggcgagccaggctgccagtactacgagcagctctgctacaacgacatg
tggctgaaagtgggagactgcgtgtacatccgctcccacgggctcgttcgcaaccgcgtg
ggcagaatagagaagatgtgggtgcgagacggagctgcctattttttcgggcccatcttc
atccatcccgaggagaccgagcatgaaccaactaagatgttctacaagaaggaggtcttc
ctcagtaacctggaagaggcctgccctatgacctgtgttggagggaagtgtacagtgtct
tctttcaaagatttcctgtcatgccggccaaccgaaatgccggaggaggatgtgttgctg
tgtgagagccgctacatcgagagcgagaagcaaatgaagaagtttaaagggctgaagcgt
ttctctctgtctgccaaagtagtcgaggatgaaatctattactttcgaaagctcatcgtg
cctcagaaggagccgtctccactgctcgataagaagatcgaagagttggaggccaagttt
gcggacatgacggatgaagagctggaggatctgggtgatgatgatggagacggttctgac
gctcactgcatgcctcagcttcagactcagctgaccggtgacatggacatgctgcattat
gcccccccgcagtccacaccgaagtccattaagggtttgtcgaagaaggagggggcaaag
aggaagatcaacatgagtgggtacatcctcttcagcagtgaaatgagagctgtcatcaag
gcccagcaccctgacttctcttttggagaactcagtcgactggtgggcaccgagtggagg
aacctggaggccactaagaaagcggagtacgaagagcgggcagctaaagtagcggagcag
caggagcgggaaagagccgcgcagaactccccgagagcaggtaccccagtaggggcgcta
atggggctagtgccccccccgacccccatggggatgcttagccacagcatgacgcctatg
gcaggaaaaggcatgctgggtagttacaggccacccatgctgccctttcaggggcctgtc
gacggcatgattaacatggccggcatgcctctacatcccatggggatgcctgccttacct
ctccacttcccgtggggaaagcctggcatgccgtatctgggaatgaatggagtggccgcg
ggttcaacaggaagtgcttatgggactcagatgggtgtgatgaactcaggcctacaggct
ccgcccccctacccgggacaggggcaggctgggacgccctctctacagcagccgtccaca
cccatattcgtgtctcctccacccaaaccccagcgcctgctgcactcagaggcttacctg
aggtatattgaaggactcagtgcggagtccaccactgtcagcaagtgggaccaaacactc
tccgctcgcagaaaagatgtgcggctcacaaaagagcaggagagccgtctgccctctcat
tggctgaagagcaagggcgctcacaagaccatggctgacgctctgtggcgacttcgggac
ctgatgttgcgagacacactgaacattcaacagacgtacaacatccaaaacatctga
DBGET
integrated database retrieval system
