Pimephales promelas (fathead minnow): 120468208
Help
Entry
120468208 CDS
T08155
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04150
mTOR signaling pathway
pprm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120468208 (lrp5)
04150 mTOR signaling pathway
120468208 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120468208 (lrp5)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120468208 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
cEGF
EGF
HECW_N
Motif
Other DBs
NCBI-GeneID:
120468208
NCBI-ProteinID:
XP_039512816
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MELKPGALAMEILLLELLLCCSLTVIRGSPLLLFANRRDVRLVDADAGRSESAVVVSELE
DAAAVDFLFSEGLIFWTDVSEEAIKQTHYNLTTISMKEATLGKGQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWQDLDQPRAIALNPAHRYMYWTDWGEEPR
IERAGMDGTNRQIIVHNQIYWPNGLTIDLQEQKLYWADAKLSFIHKANLDGTAREAVVEG
SLTHPFALTLYDETLYWTDWQTRSIHACNKHTGEKRREILNGIYSPMDIQVLGQERQPNI
QTPCSERNGGCSHLCLLSPVPPFYSCACPTGVKLQEDGKTCRPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVSDIRHAIAIDYDPVEEYVYWTDDEVKAIRRARIDGSDAQTLITNEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRRILISENLDEPRAIVLDPINGYMYW
TDWGEKPKIERANLDGTDRVVLLNTSLGWPNGLAVDYVAGKLYWGDAKTDKIEVINVDGT
NRMTILEDKLPHIFGFTLLGEYIYWTDWQRRSIERVHIANTTREVIVEQLPDLMGLKATK
VTETSGTNGCAENNGGCSHLCFHRPQGLTCACPMGLELLSDLQTCVVPEAFLLFTNRADI
RSISLGTNSNDVPIPLTGVKEASALDFDVLENRIYWTDVSTKTISRAFMNGSLVEPVIEF
GLDYPEGMAVDWMGRNLYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALDPANGYM
YWTEWGGRPRIARAHMDGSNIVTLVDKVGRANGLTIDYIDQRLYWTDLDTCMIESTNMQG
LQREIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTVVQGHLEYVMDILVF
HSSRQDGANECSQNNSQCAHLCLASPSGAQCRCASHYILEANGRNCSSPSSFLLFSQKSS
ISRMVLGEQSPDMILPIHVMKNLRAISFDPLERLVYWVDGRQNIRRARDDGTQTSTVMTP
TGLHPKQPHDLSLDSYSRTVYWTCESTNTINIHRMDGHVIGEVLKDDADKPRAIVVNAEK
GYMYFTTVQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIES
SDLSGANRIVLQDSNILQPVGLTVLGDHLYWIDKQQQMIERVDKLTGEKRTRIQGRLQYL
TSIHAVEYMEPEEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQNLLSCGEPPT
CSSEQFTCATGEIDCIPMAWRCDGIAECADHSDEMNCPICSELQFQCDKGQCVDAQLRCN
GEPDCADGSDELDCDTICMPNQFRCGNNQCILKKQQCDSFADCTDKSDELFCDFPPPPND
LPRHTSTIGPVIGIILSVFVMGGMCFVCQRVVCRHYKGPNGGFPHEYISGTPHVPLNFIA
PTNSQHGTFTGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAFYPQML
NPPPSPATDRSLYNAEVFYSSNSPSTTRSYRPYLKRGVAPPTTPCSTDVCDSDYTTSRWK
SNKYYMDLNSDSDPYPPPPTPRTPRSQYMSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaagcctggagcgcttgcgatggagattttattgctggaactgctgctttgt
tgtagtctgacggtgattcgtggttctcctttgctgctcttcgccaaccggcgggatgtt
cgtctggtggacgcggatgcgggccggtcggagtccgctgtggtcgtcagtgaacttgag
gatgcggccgctgtggactttcttttctctgagggcttgatattctggacggatgtcagt
gaggaggccatcaaacagacccactacaacctcactactatctctatgaaggaggccacg
ctgggcaaagggcagacagtagtggtatcaggtctggattctcccgatggcttagcctgc
gactggctcggacgcaaactctactggaccgactctgagacgaaccgcatcgaagtagcc
aacttggacggcacctctcgtaaggtgctcttctggcaagatcttgaccagcccagggca
atagcgctaaaccctgctcataggtacatgtattggaccgactggggggaggagccgaga
atagagagggcgggaatggatggcaccaatcgccaaatcattgtacacaaccaaatctat
tggcccaacggactgaccattgacctccaggagcagaagctctactgggcagatgccaag
ctcagcttcatccacaaggccaacttggacggaacggctcgagaggcagtcgtggagggt
tctctcacccacccattcgcccttactctttatgacgagacgctctactggaccgactgg
cagacccgatccatccacgcttgcaacaaacacaccggagagaagcggagagaaattctt
aatgggatttactcaccgatggacatccaggtgctgggccaagagcggcagcccaacatt
caaactccatgcagtgaaagaaacggaggctgttcccacctgtgtcttctctctcccgtg
ccacccttctacagctgtgcttgtccaacaggggttaaactccaagaggatggaaagact
tgtcgaccaggggcagaacaggtgcttctactggctcgccgtacggaccttcggcggata
tccctggacttacctgacttcacagacatagttttacaagtcagcgacatccggcacgca
attgccattgactatgacccggttgaagaatacgtctactggacggacgatgaggttaag
gccatccgccgcgcccgaattgatggaagcgacgcccagactctgatcaccaacgagatc
aatcatccagatggaattgcggtggattgggtggcacgcaacctctactggacggacact
ggcaccgatcgcattgaggtgaccagactcaatggcacttctcgacgcatcctcatatct
gagaacctggacgagccacgagccatcgtgttggatccaataaatggatacatgtattgg
actgactggggggagaagcccaagatcgaacgagcaaacctggatggcactgaccgggtc
gtgctgctcaacacctctcttggttggcccaatggtttggctgtcgactatgttgctgga
aagctttactggggcgatgccaagacggacaaaattgaggtcataaatgtcgatggcacc
aataggatgaccattctagaggacaaactacctcatatctttggttttacgctgttgggg
gagtatatctactggactgactggcagcggaggagcattgaaagagttcacattgccaac
accacccgtgaggtcatcgtcgagcaacttcctgacctcatgggtctcaaagccacaaaa
gtcacagagacctctggcactaacggctgtgcggaaaacaacggcggctgcagtcacctg
tgctttcatcggcctcagggtctgacctgcgcctgccccatgggcctggagttgctgagt
gacctgcagacttgtgtggttcctgaagcttttttgctcttcaccaaccgcgctgacata
cgcagcatctctctgggcaccaatagcaacgatgtgcccattccactcaccggggtcaag
gaggcctccgcactggactttgatgttttagaaaacagaatctactggaccgacgtcagc
accaagactatcagcagagccttcatgaatggcagtttggttgaaccagtcattgaattt
ggcctggactaccctgagggaatggctgtggactggatgggtcgaaacctctactgggcg
gataccggcaccaaccgaattgaagtggcccgtctggacggccagtaccgacaagtgctg
gtctgtaaagacctggataatcctcgctctcttgctctggaccctgccaatgggtacatg
tactggactgaatggggaggtcgtcccaggatagcccgcgctcacatggacggaagtaac
atcgtgactttagtagacaaagtgggccgagccaacgggcttacgattgactacatcgac
cagcggctctactggacagacctggacacctgcatgattgagtctacaaacatgcaaggt
ttgcagagggagatagtggccgacgatcttcctcatccttttggcttgacccagtatcgt
gactacatctactggaccgactggaacctgcgcagtattgagcgggcggacaagcgcagt
ggcttgaaccgaaccgtagtgcaggggcacctggagtatgtcatggacatcctggttttc
cactcctctagacaagatggcgccaacgagtgttcgcagaacaacagccagtgcgcccat
ctctgcctagcatccccctctggagcccagtgccgctgcgcttcccactacatcctggag
gcaaacggacgcaactgcagctcgccctctagcttcctgctcttcagccagaagagctcc
atcagtcgaatggtactgggagagcagagtccagacatgattctaccaatccacgttatg
aagaacttgcgtgccatcagctttgacccgttggaacgcctggtctactgggtggatggc
cgacaaaacatccgcagggcccgggacgatggcactcagacctccacggtgatgacccca
accggtcttcacccaaagcagcctcacgacctgagtctggactcctacagtcgcaccgtc
tactggacctgcgagagcaccaacaccatcaacatccatcgcatggatggccacgttatc
ggagaggtcctgaaggatgatgcggacaagccacgtgctattgtggtgaacgctgaaaaa
ggctacatgtatttcactaccgtccaggatcgctcagctaaaatcgaaggtgcgtctttg
gatggaacggagcgtgaatccttgttcacgaccggtttgatccgccccgtggctctggct
ttggacaacaagctgggcaagctgttctgggtggatgcagacctgaaacgcattgaaagc
agtgacctatctggggccaatcggatcgttcttcaggactccaacatccttcagccggtc
ggtctgacagtgctgggcgatcacctgtactggattgacaaacagcagcagatgatcgag
cgcgtggacaagctgaccggagagaagaggacccgcattcaggggcgactccagtacctg
accagtatccacgcggtggagtacatggaaccagaggagtttgcatcccacccttgttcc
cgtgataacggaggctgctcccacatctgcatcgctaagggtgatgggacgccacgctgc
tcttgtcccatgcacctggtgctgcttcaaaatctactcagctgcggagagcctcccacg
tgctctagcgagcagttcacctgtgctactggtgagatcgactgcatccccatggcgtgg
cgctgtgacggcatcgccgagtgcgcagaccacagcgacgagatgaactgccccatctgc
tccgaactccagttccagtgcgacaaaggccagtgcgtggacgctcagctgcgctgcaat
ggagagccagactgcgcagacggctctgatgaactggattgcgacaccatttgtatgcct
aatcagttccgttgtggcaacaatcagtgtatcctgaagaaacagcagtgtgactccttc
gcagattgcacagacaaatctgatgagcttttctgtgatttccctccgccccccaacgac
cttccgcgtcacaccagcaccatcggccccgtcatcggcatcatcctctctgtctttgtg
atgggaggcatgtgttttgtgtgtcaaagagtcgtgtgtcgccattacaagggccccaat
ggaggctttccacacgagtacatcagcgggacccctcacgtgcccctcaactttatcgca
cccacaaattcacagcacggcacttttacaggtatttcctgtgggaagtccatgatgagc
tcagtgagtctcatgggcagcagcagcagtggggcgcctctctacgacagaaaccatgtg
acaggagcttcatccagtagctcttccagcacaaaaggagctttctatccgcagatgctc
aaccctcctccatcaccagcaacagatcgctccctttacaacgcagaagtcttctattcg
tccaacagcccttccacaaccaggtcttacaggccatatttgaaacgaggggtcgcgccc
cccaccacaccctgcagcacagacgtgtgtgacagtgactacaccaccagccgctggaaa
agcaataagtactacatggacctcaattcagactctgacccctaccccccgccccccacg
ccccgcacaccgcgcagccagtacatgtcagcggaggagagctgccctccctcgccctcc
actgagcgcagctacttccacctgtgccccccgcccccctcgccctgcacagactcctcg
tga
DBGET
integrated database retrieval system
