Pimephales promelas (fathead minnow): 120478705
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Entry
120478705 CDS
T08155
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03265
Virion - Ebolavirus and Lyssavirus
pprm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
120478705 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120478705 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120478705 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120478705 (ncam1b)
04090 CD molecules [BR:
pprm04090
]
120478705 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120478705 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
120478705 (ncam1b)
Membrane trafficking [BR:
pprm04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
120478705 (ncam1b)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
NCAM1/2
120478705 (ncam1b)
CD molecules [BR:
pprm04090
]
Proteins
120478705 (ncam1b)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120478705 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprm00537
]
Others
120478705 (ncam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
V-set_CD47
Ig_5
Ig_6
C2-set_2
C1-set
Pur_ac_phosph_N
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
120478705
NCBI-ProteinID:
XP_039526690
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MFPTKAIILVLLFFGSAVSLQVDITPAQSEISVGESRFFLCEVIGGAKEIDWFAPTGEKI
EPGKQDVSVIRNDETSSTLTIYNAKVDNAGTYRCVASSGDQDAEATVNLKIYQKITFTNV
PSPQEFSEGDNAIIVCDVISSPPPTVLWKYKGAKIQFEKDVRFRTLNNNHLEIRGIRKTD
EGVYTCEGRIKARGEVDFRSIKVVVNVLPTIRIRQAETNATADNGFSTLLACDADGFPEP
MVTWVRNNIPLESGDKYNFNEDGSEMTIQDVTKLDEGDYTCIASNKAGKSEQELSLKVFV
QPKITYLESQTTTEMDERVTLTCEATGDPTPTITWSFGTKVFTEGEQEHQKRIYQASWTR
PEQHKSPDGEVLVRSDARVSSLTLKYAQYTDAGEYLCTARNAIGETSQPVYLEVRYSPKI
LGPVAVYTWEGNPANISCEVLAHPSDVSITWLRDGLQLPNANTSNIKIYNRPSASYLEVS
PESQSDFGNYNCTASNEIGTESREFIMIPADVPSAPSITQVLPYSSTAQVLFEEPVSTGG
VPVLKYRAEWRAVGRGKWVQRVYEVKDAGLNSVTVTGLKPENDYEVKMSAINGKGEGDSS
QSLVFKTEQVRYSITNGIFHFHTEDTEGEPSPPILEGTLHSKGNALKVKWTKQDDGGSPI
THYLVRYKPREDPDWKPEIRLPNVSEYLMLTGLEWDTEYDVFVVAENQQGKSKPGTLTFK
TSSEPAATTDSMEDGTGLNTGVIVGILILVCVLLLLIVDATCCFLNKCGILMCICGKPGQ
GTKGKDIETGKAAFVQDVSKEPIVEVRIEEEATANHDAEGHPEPNETTPLTEPEQGTRTA
AAVVDLPLSVPTNSDTNTDTFDLSQSSPVSESTTLTSSITAPPSDSPNPIHMTPPDSSTP
KTHTKPSISSPSSSDPANVTLLVDLGDAPKTQAEVPLVIPSEGPPSLPGVANSKVTENEL
ESPESVQGASHDTLNPISPQGSVAIPLVNHELEIDGELPLAPDTDVPQDGSHAVGTAGSS
GPSAPAQDEKILDNERRTTKNTELKKVVPGTGAEPNALSQTNNTESKA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgaccaaggcgataatcttggtgcttcttttctttggcagcgcagtttctctg
caggtcgatattacacctgcacagagcgagatcagtgttggagagtctcggttctttttg
tgtgaagttatcggtggggccaaggaaatcgattggttcgctccaaccggggagaaaatc
gagcccggcaaacaagacgtcagtgttattcgcaatgacgagacgtcttccactctcacc
atctacaatgcaaaggtcgacaatgccgggacatatagatgtgtggccagcagcggtgat
caggatgctgaagctacagtcaatctgaagatataccaaaaaatcacttttacaaatgtc
ccatcacctcaagagttcagtgaaggagacaatgccattattgtgtgtgatgtcataagc
tcacccccacccactgttctctggaaatacaaaggtgcaaagatccagtttgaaaaagat
gttcgtttcaggacactgaataacaaccatctcgaaatccgagggatcaggaagacagat
gagggggtgtacacttgcgagggccgcattaaagcccgtggagaagttgacttccgcagc
attaaagtggttgttaacgtcctgcccactataagaatccgtcaagctgaaacgaatgcc
actgctgacaatggcttctcaaccctactggcctgtgatgctgatggatttcctgagccg
atggtgacctgggtgcggaacaacattccactggagagcggggataaatacaacttcaat
gaagacggctcagagatgacaatacaagatgtgacaaagctggacgagggagattacacg
tgcattgcttcgaataaagctgggaagagcgaacaagaacttagccttaaagtctttgtg
caacccaaaatcacatatttggaaagccagactaccacggaaatggacgaacgggtcacg
ttaacatgtgaggccaccggagaccccacacccaccattacctggagctttggcaccaaa
gtcttcaccgagggagagcaggagcaccaaaagaggatttatcaggcctcttggactcgg
cccgaacagcacaagagtcctgatggtgaagtgttggtccgcagtgacgcccgcgtgtct
tctctcaccctgaagtacgctcaatacacagacgccggcgagtatctctgcaccgcccgc
aacgccatcggagagacgtcgcagcccgtgtatctggaagtgcgctactccccaaaaatc
ttgggaccagtagctgtgtacacgtgggagggtaacccggccaacatcagctgtgaagtg
ctggctcaccccagcgatgtgtctattacgtggctgagagacggcctccagctgcctaac
gctaacacctccaatatcaagatctacaacaggccttccgccagctacctggaggtcagt
ccagagtctcagagcgactttggcaactacaattgtactgcctccaatgagatcgggact
gaatccagagagttcatcatgataccagctgatgtgccctcggcgccgtccatcactcaa
gtgctaccgtactccagcacggctcaggtgcttttcgaagagcccgtgtccactggagga
gttcctgtgctcaagtaccgagccgagtggagagctgtgggtcgagggaaatgggtgcag
cgagtctatgaggtgaaagatgcaggactgaattcagtcacagtcaccggccttaaaccc
gaaaacgattacgaagtcaagatgtctgccatcaacggcaagggcgaaggcgacagcagc
cagtcattggtcttcaaaaccgagcaagtccgttattctatcacaaatgggatttttcat
tttcatactgaggacacagaaggagaacccagtcctcctatactcgagggaactctgcac
tccaaaggcaatgctctcaaagtaaaatggaccaaacaagacgatggcgggtcaccaatc
acccattatttggtcagatacaaacctagggaagaccctgactggaagcctgagatccgt
cttcccaacgtgagcgagtacctaatgctgaccggtctggaatgggacacggagtatgat
gtgtttgtggtggcagagaaccagcagggcaagtccaagccgggtaccctgaccttcaaa
acctcgtctgagcctgcagctaccacagactccatggaagatggaacgggcctgaacact
ggagtaattgttggtattcttatattggtgtgtgtgctgctcttgctgatcgtggacgcc
acctgctgcttcctcaacaagtgtggcatcctcatgtgcatctgcggtaaacccgggcaa
ggcaccaagggcaaagacatagagacgggcaaagcggcctttgttcaagatgtgtctaaa
gaacccattgtggaagttaggatagaggaagaggccacagccaatcacgacgcagaagga
catcctgagcccaatgagaccaccccactgaccgaaccagagcaagggacaagaactgcc
gccgcagtggtggacttgcctctttccgtgcccactaactcagacacaaacactgacacc
tttgaccttagccagagcagcccagttagcgagagcaccactctcacctccagcatcaca
gcgcccccttctgactctcctaaccccatccatatgacaccacccgacagcagcacacca
aaaactcacaccaaaccctccatctcatctccctcatcctccgacccggctaatgttact
ctcctggtagacctgggcgatgccccaaaaacacaagctgaggttcctctagtgatcccg
tcagaaggacccccttcccttcccggcgttgcaaactcaaaagtcacagaaaacgaatta
gagtcgcccgagtctgttcagggtgcatctcatgacactttaaatcccatcagcccacag
ggcagtgtcgctatccccttagtgaatcatgaacttgagattgatggagaactcccactg
gctccagacacagacgtcccacaggatgggtcacatgctgtggggacagctggctccagt
ggcccatctgctccagcacaggacgagaaaattctggataatgagaggaggacgaccaaa
aacacagagctgaagaaagttgtgcccggcacgggagcagaacccaacgccctctcgcaa
acaaacaacactgaaagtaaagcatga
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integrated database retrieval system
