Pimephales promelas (fathead minnow): 120479527
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Entry
120479527 CDS
T08155
Symbol
psda
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein psda
KO
K12494
PH and SEC7 domain-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120479527 (psda)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120479527 (psda)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
120479527 (psda)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
PH_9
PH
EzrA
Motif
Other DBs
NCBI-GeneID:
120479527
NCBI-ProteinID:
XP_039528041
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MSQSGKILHLYVEVRSVTDEDGKDLGDVEKTDSLMLTAPDILPQSQYGGSNAPHDRASPR
GVLHKGGSSTQSLASSKSTSRHSVSFQLHPGHDSEQPGSQHQKSLPYDEISQLLSAFQTG
TTGNTRHLVCAPSERDPSFGKDPHFSGWFTAPPTPSGTRKACSPTKIKGGDEGRRSFATF
SYIEKAKIKSVEGQYNSLCQSEPQNPFNRTMENRATPLHLRKRLSDPVWLENSLESINNC
SSKQLSQGLGNSHMSPPSIRRATLDSVAREATHRALEEFGSPQLRQKLAGNCPDRGHDVR
REQRRCQSWSGSPVLPCSSRTLPPKATIMDHERNSSFYRLPRSPATDQLSNHAKQAYFTM
SHSTVNTQEASNQRAQGYRYRPNLPSCKPTAIQHELPSMIVTQPSSNQRICHSMNDSSRQ
AHRVNFKLANSKNKVEEANLLSGRRSVSPASSPELACKLAEEAIKLSILMEARRSPSPTQ
SSTDTVRSDSPHLGHSREPQLYASFQGSASKPQSNYKLSVQDHHWKHESVETGHQSVQTT
SLLPHLGSTSPAAPARLKRSDVISSSPIRDPRIERTELDGKDSPTLHRHLPSQYTRNNHT
PNNECWRYESLKSKKDSPDNSRRPFTRANPNSPASWTFLQKNGIEECLTRDKESLKEVNN
HKRNSPAIPGSQENHCRVLMQRNEMKGDTRANKELSGTASQSSSGVTGSLIDSTLHEKEC
ISSETSSRTSQKSSDSGKTDTQSESGPFLLRPSLHSQKMARAKWEFLFGSHCEDQHETKG
SSTTPSSGCSSESPTPISPSSTPQRPVTSYLRHCKSTASSKSSCHDVQQVKVELIHHHPT
VGSSNMTGIIRRTVKYSETDIDAVSQRCYKETNLDEVMLAEQEEVDSAFGSNRSVLGTSG
TNSSSPLEGMLCPYTDGEEELQDEEVVSWASVRMQGDKKRQNATPEGDEVFSRLLRGXSL
DCQPDSHTSLKSPISVTSPCRISSDGLDSFSRHFESIMESHRAKGTSYSSLDSEDITPSG
PPVFTFDFPTLTPEIQSQICESAKQIIELSFAPLTCPEPPAVSDPIELGVYEEESPFSSG
SCSDQVPGPDSDTDAAIRERPSRPVSESDPEVAERLAIGSTETLANGNKADLQAAKRLAK
RLYNLDGFKKSDVARHLSKNNDFSSMVAEEYLSYFNLSGMTVDQALRVFLREFALVGETQ
ERERVLSHFSKRYLQCNPNTIPNEDSVHTLTCALMLLNTDLHGHNIGKRMSCSQFISNLE
GLNDGQDFPKDLLKALYNSIKNEKLQWTIDEEELRKSFSELDGRTDSASHTMKRINSGGN
PLVSVAQQSSAQVYNNGFLVRKVHADADGKKTPRGKRGWKTFYVILKGLILYLQKDEYRP
DKQLSDEDLKNAVSIHHSLAMRAADYSKRPNVFYLRTADWRVFLFQAPNAEQMQSWITRI
NIVAAMFSAPPFPAAIGSQKKFSRTLLPGSNTKLSQEEQLKSHETRFRAISADLQDLRST
LHIDRRTKSKDQEEYKQREEYLDFEKTRYGTYAMLLRAKIRTGETDLEAFEARLFDDGGL
QRAHSSPTLPQDHSHASSHASSHASSHASSTKESSRSSSGGSRRTKRSDGQRHSYRQAVK
Q
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcaggtaaaatccttcacctctatgtagaggtgaggtctgttactgatgaa
gatggaaaagacctaggagatgtggagaaaacagactccctcatgttgacagcaccagac
atccttccacagtctcagtatggtggctctaatgccccacatgaccgggcatctccacgt
ggagtcctgcataaaggtggaagcagcactcagagcctagcctccagtaaatcaacatct
agacactctgtaagttttcagctacacccaggacatgactcggaacaaccgggttcccaa
caccaaaagagtctaccttatgatgagataagccagttactctcagcttttcaaacagga
accactggaaatacacgtcacttggtgtgtgctccttctgaacgtgacccctcctttgga
aaggaccctcacttctcaggatggtttactgcccctcctactcccagtggaacccgtaag
gcatgcagcccaactaagataaaggggggagatgaagggagacgatcttttgccactttc
agttacattgaaaaagctaaaattaaatctgtagagggtcagtataactctttgtgccaa
agcgagcctcagaatcccttcaacagaaccatggagaatcgagctacccctctccacctc
aggaaaaggcttagtgacccagtgtggttggagaacagcttggagtccataaacaactgc
agctcaaaacagcttagtcaaggtttggggaactcacatatgagcccccccagcattagg
cgggcaactctagactctgttgcgagagaagccacccatcgagcattggaggaatttggt
tccccacaactaaggcaaaaactggcaggaaactgccctgatagaggtcacgatgtcagg
agagaacaacgtcgctgtcagtcttggtctgggtcaccggttttaccatgcagttctagg
accctgccccctaaagcaacaatcatggatcatgagcggaatagttcgttttatagactt
cctaggagccctgctactgaccaactgtctaaccatgccaagcaagcctactttaccatg
tcacactcaaccgtcaacactcaggaggcctcaaaccaaagagcacaagggtataggtat
aggccaaatttaccatcctgtaagcctacagctattcaacatgaactgccatctatgatt
gtaactcaaccatctagcaatcaacgaatctgtcattccatgaatgacagttcacggcaa
gcccacagagttaatttcaaactagccaactccaaaaataaggtagaagaagctaaccta
ctgagtggaaggaggagtgtatccccagcctcaagtcctgaattggcttgtaaactagcg
gaggaagccatcaaactctccatacttatggaagccaggaggtctccatccccaacgcaa
tcgtcgacagacacagtgcggtctgacagtccccatttagggcattcaagagagcctcaa
ctatatgctagcttccaaggctcagcatcaaaaccccaatctaattacaaactttctgtt
caggaccaccattggaaacacgagtctgtcgagactggtcaccaatcagttcaaacaacc
tctcttttgccccaccttggaagtacatctcctgcagctccagcaaggttgaaacgatca
gatgtaatatcatcctctcccatacgagacccacggatagagagaacagagttggatgga
aaggacagcccgactttgcaccggcacctcccttcccagtacacaagaaacaatcataca
cctaacaatgaatgttggcggtatgagagtctcaaaagtaaaaaagacagtccagataac
agcaggagaccattcacaagggctaatccaaattctccagcaagttggacctttctccag
aagaatgggatagaagagtgcttaaccagagacaaggaaagcttgaaggaggtgaacaat
cataagaggaatagtccagctataccgggctctcaagagaaccattgtagggtcttaatg
cagcgaaatgagatgaaaggtgacactcgggctaacaaagagttgagtggtacagcatca
cagagctccagtggagtcacaggcagccttatagatagcactctacatgagaaagagtgc
atatcctcggagacatctagcagaaccagccagaagagttctgactctggaaaaacagac
acacagtctgaaagtggaccatttttgctgagaccttccttgcactctcagaagatggct
cgtgctaaatgggagttcctgtttgggtcccactgcgaagaccaacatgaaacaaaaggc
tcctccactacaccctccagtggctgttccagcgagtctccgacacccatttcaccctcg
tctaccccgcaaaggcctgtaacatcatacttaagacactgtaaatcaaccgcctcttcg
aaatcctcatgccatgatgtacagcaagtcaaagtggagttaatccaccatcatcccaca
gtgggatcctccaatatgaccggcatcatcagacgcactgtcaaatattcagagacagac
atagatgcagtgtcccagcgctgttacaaagaaacaaaccttgatgaggtgatgctagcg
gaacaggaggaagtggactctgcttttggcagtaaccgcagtgtgctgggaacctcaggc
actaacagcagcagccccctggagggaatgttgtgcccatacacagatggtgaggaggag
ctgcaagatgaagaggtggtgagctgggccagtgtgaggatgcaaggcgacaaaaagagg
caaaatgccacacctgagggagatgaagtgtttagccgactactgagagggtgatcctta
gattgccagcctgacagccacacgtctttgaagtctcccatctctgtgaccagcccgtgc
cgaatctcatcagatggcttggactctttcagcagacactttgagagcattatggagtca
caccgtgctaagggcacctcttatagcagcttggatagtgaagacattactcctagtggc
ccaccagtcttcacttttgattttccgactctcactcctgagatccagagtcagatctgc
gaaagtgccaagcagatcatcgaactgagctttgctcctcttacgtgtcccgaaccacct
gctgtgtctgatcccatagagttaggtgtctatgaagaagagagtccgttctccagtgga
tcctgctctgatcaagtccctgggcctgattctgacacagatgctgccataagagagagg
ccatcacggccggtgtcggagtctgatccagaggtagcagagcgattggctattggcagc
actgaaactctggccaatggcaacaaagctgatctacaagctgcgaaacggctggccaaa
cgtttgtacaatctcgatggatttaagaagtcagacgtggcacgtcatctgagcaagaac
aatgattttagtagcatggtcgcggaggagtatctaagttattttaacctctcaggaatg
acggtggatcaagcactgagagtgtttttgagagagttcgccctagtgggagagacacaa
gagagggagagagtactatcgcatttctctaaaagatacctccagtgcaacccgaacact
ataccaaatgaagatagtgttcatacactgacttgtgccctgatgctgctcaacactgat
ctgcatggtcataacatcgggaagaggatgtcctgctcacagttcattagtaacttggag
ggactgaacgacggccaagacttcccgaaagatcttctaaaggctctctacaactccatc
aaaaatgaaaagctacagtggacaatcgatgaggaagaactgcgcaaatctttctctgag
ctggacggcaggacagactcagcatcgcacactatgaagaggatcaacagtggaggaaac
cccctcgtcagtgttgcacagcagtccagcgctcaggtctacaacaatggctttctcgtg
cggaaagttcatgctgatgctgatggcaaaaaaactccccgaggtaaaagaggatggaaa
acattttatgtcatccttaaaggactgattctctacctgcaaaaggatgaatatcgtcca
gataagcagctgtctgatgaggacttgaagaacgcagtatcaatccatcattctttagcc
atgcgggcagcagactatagcaaacgacccaatgtgttttaccttcgcactgctgactgg
agagtctttctcttccaggcccccaacgcagagcaaatgcagtcctggatcacccgcatc
aacatagtggccgccatgttctctgcccctcccttcccagcagccattggctcccaaaag
aagtttagccgtacccttctgccgggctcaaacaccaaactctcacaggaggagcagctt
aagtctcacgagacacgatttcgagccatttctgctgatctccaggacctgcgctctacc
ctacacatagaccgcaggaccaaaagcaaggaccaagaagagtacaagcaaagggaagag
tacctggactttgagaaaacacgctacggaacatatgcaatgctgctgagagctaagatc
cggacgggggaaacagacctggaagcgtttgaagcccgtttgtttgacgatggtggcctg
cagagggcccattccagccccacgttaccacaggaccacagtcatgccagcagtcatgca
agcagtcacgcaagcagtcatgccagcagcaccaaagagtcgagcaggagcagcagcggc
ggcagcaggaggaccaaacgctcagacggtcagagacacagctacagacaggctgtcaaa
cagtga
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integrated database retrieval system
