Pimephales promelas (fathead minnow): 120482726
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Entry
120482726 CDS
T08155
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
120482726 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120482726 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120482726 (clip1b)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120482726 (clip1b)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
120482726 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
120482726
NCBI-ProteinID:
XP_039533242
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MSTGKPSGLKPPTKIGKPASAPTKTSPTSAGAKAVTSPTSNSGQDAPSDFSVGERVWVNG
NKPGSVQFIGGTQFAPGQWAGIVLDEPIGKNDGSVSGVRYFQCMDLRGIFTRPSKLSRTP
VAELETNGTQTPANKSSASPAKDPAPVTQTIIATTKSSSNLTRATSESASNMSETDSAKK
LQRDMKLGDRVLVAGSKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGVRYFQCLP
KYGLFAPTHKVTRIGFPSTTTAKSKSSRRRSTLKNSPSASSVSSLSSVTSSVGGKPSRAG
LLTETSARYARKISGTTALQEALKEKQQHIEQLLAERDMERTEVARATSHAGEVQQELAL
LRQGQEQYANEMEAKLDQLRRLVETADRDKVELMNQLEEEKRKVEDLQFRVEEAYITKGD
LETQTKLEHAHIKELEQSLLFEKTKADKLQRELEDTRVATVSERSRIMELEKEVSDLQLQ
LRTLRAETSGSASPPLQDKKIKELNLELENRQKEVLLFQQKLSSSEQEKASLQQQLQDLT
NKLDSAAEDKNKATLAMQEMERNMKTEREKLDQVSREKEELLKKQVKDEEREIQMKELKE
KLGQTEGELSRIAERSVGLERQVAELKAYKNQTQSNENLEQMMHKNKELQEELEALKQQN
SQYQEQLCSGTQRIGNLCKEIDEGKLSANQKSQRQVSLQDEKGMLAQELDVYNKQLDDEA
LTSHLEITERENSNAVMSDKDKELETLRNEIAVLRGENAVAKTLQSAVTSLERDKAQLQS
RVNSLEKKLEGRETGNGEEVISVGDPALDQLREEKEFAEGQINFLNSVIVDLQRKNEELK
VKLKKMALTEFNGNDENDDLGKDKKKKKAPPRVFCDICDCFDLHDTEDCPTQTQSPDSPP
HTTHHGARSGERPYCDICEAFGHWTDSCNDDQTF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggggaagccaagtggtctcaaaccacccaccaaaattggtaaaccagcttcg
gcgccaaccaaaacctcgcccacctcagctggtgccaaggctgtaacatctccgacctcc
aatagcggccaagatgcgccgtcagatttctctgttggcgaacgtgtctgggtcaacgga
aataaacccggttctgtgcagttcatcggagggactcagtttgcaccaggccagtgggca
ggaatagttctagacgagcccatcgggaagaacgatggctctgtgtctggagtgcgctac
ttccagtgtatggacttgcgaggcatatttactcggccctccaaactctctcgtactccc
gtggcagagcttgagaccaatggcacgcagactcccgccaacaagtcgtctgcctcccct
gccaaagatcctgctcctgtcactcaaaccattattgcaaccaccaagtcctcatcaaac
ctcaccagggccaccagcgagtctgcctccaatatgtctgagacggattcggccaagaag
ttacagcgggacatgaagctgggtgatcgtgtgctggttgcaggatccaaggcaggtgtt
gtgcgcttcctgggagaaactgacttcgcgaaaggtgaatggtgtggcgttgagctggac
gagcctcttggcaagaatgatggggcagtggctggtgtaaggtattttcagtgcctccca
aagtatggactgttcgctcctacgcacaaagtcacacgcatcggattcccgtccaccact
actgccaaatccaaaagctccaggcgcaggtcgaccctaaagaacagcccgagcgcatct
tctgtcagctccctcagctctgtcacctcctcagtaggaggcaaacccagccgagcgggc
ctgctcacagagacgtctgcacggtacgcacggaagatctcaggcaccacggccctgcag
gaggccctgaaggagaagcagcagcacatcgagcagctcctggctgagcgggacatggag
aggacggaagtggcacgagccacaagccatgctggagaggtgcagcaagagctggcactg
ctcagacagggccaggaacagtacgccaacgagatggaagccaagttggaccagttgcgg
agacttgtggagactgcagaccgagataaagtggagctgatgaatcaactggaagaggaa
aaaagaaaagtggaggacctgcagttccgtgtagaggaggcttatattaccaaaggtgac
ctagagacgcagaccaaactggagcatgcccacattaaggagctcgaacagagtcttctg
tttgaaaagaccaaagcagataaactccagagggagttagaggatactagggtcgccacg
gtgtccgagcgctccaggatcatggagctggagaaggaggtgtccgacctgcagcttcag
ctgagaactcttcgagccgagacctcgggatcagcctcccctccattacaagacaaaaag
atcaaggagctgaacttggagttggagaacagacagaaggaggtgcttctattccagcag
aaactctcctcctctgaacaggagaaagcatccctccagcagcagctgcaagatctgaca
aataagcttgactcagctgcagaggacaaaaataaagcaacacttgcaatgcaagaaatg
gaaaggaacatgaaaacggagagagagaagctggatcaagtatccagggagaaggaggaa
ctgctgaagaaacaggtgaaggatgaagagagagagattcagatgaaggagctgaaggag
aagttgggccaaacagaaggagagttgagcagaatcgcagagaggagcgttgggctggaa
cggcaggtggcggaactgaaagcctacaagaaccaaacccagtctaatgaaaacctggag
cagatgatgcacaagaataaggagttgcaggaggagcttgaggccctgaagcagcagaac
tctcagtatcaggagcagttgtgttcaggaactcagcgcatcgggaacctctgcaaagaa
attgatgagggaaaactgtcagccaatcagaagtctcagaggcaggtgtcgctccaggac
gagaaagggatgttggctcaggagttggacgtctacaacaaacagcttgatgacgaagct
ttgactagccatctggagattacagagagagagaattccaatgcagtgatgtccgataaa
gacaaagagctagagacgctacgaaatgagatcgcagtgctgcgtggggaaaatgccgtg
gccaagacgctgcagtcggccgtgacgtctctagaaagggacaaagcccagctgcagagc
cgagtgaacagcttggagaagaagctggagggccgggagacggggaacggagaggaagtc
atctcagtgggtgatcccgctttggaccaactgagagaagagaaggagtttgccgaggga
cagatcaacttcctgaactctgtgattgtggacctccagaggaagaatgaagaactaaag
gtgaagctgaagaaaatggcgctgaccgagttcaatggaaatgatgaaaatgatgatctt
ggtaaggacaaaaagaagaagaaagccccaccacgcgtcttctgtgacatctgcgactgc
ttcgacctgcacgacacggaggactgtcccacgcaaacgcagtccccagactcgcctccg
cacaccactcaccacggggcccgcagcggcgaacggccgtactgcgacatctgtgaggcg
ttcggtcactggacagattcttgcaacgatgaccaaaccttctga
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