Pimephales promelas (fathead minnow): 120484719
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Entry
120484719 CDS
T08155
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120484719 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120484719 (phc1)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
120484719 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120484719
NCBI-ProteinID:
XP_039536052
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All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MEAGEDQTNSSSANSSAASGGNSRPPQIAQMSLYERQAVQALQALQRQPNAAQYFQQLML
QQQINSAQLHNLAAVQQATLAASRQSSSPSNSVSQATSTAQCTVNLSTTSGGGTMSNPRP
IGPATLATSTALSQSVLLGGNSGGQGQMYLRVNRSLKTPLAPQLIFMPGGTATAAVATVA
QQQTQQQQQETTPTSSSNQSDNDQVQNLAMRCVSTPRVATVKTEFADRKEMSGSYPINQQ
PQTQQQFGQSAQQIQAQAQPLANAKLQNYSNTTNPNMSGLTVKGTNQSAVTPQQTGGSSN
PPSSSPSPSLPLSQLLLSQSGLCQARGVPAAAATVTHILVPTSNVPTSSQGYPMGTVATK
SNMTAQTLVVQPLQQTGVNLGSEKLGHGTGHVPIQPKTAQGHRPPVQMQPRHPPPILPAP
PNNGQATGGHHPPHVPVQLVGARQSTLGNSQALAVAQARACCAQQDATAVVPVNNSGSNA
VTMMTPGETGGAGMCLKTAQSALPMSQMQTNQCAALSLGNSASVTHSMDGQNNSGDSVFV
QSGPVQTKPVIGQLKRKSESDLPNEMSTETINASLLMQDSAPPLSPAPSLDTAPEMAFSS
PPTLSLSLPLPRVGGQGDRAPVPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPLKELPVA
VPPILHRENIRSDKLKCEYCQRFAPANQFRRSKRFCSKTCAKRYNVSCSNHYRVSRGLEG
AERPPGSPVVQDVIARRRGPRRSSSEIACAKISGRHLPVKCRSESSRSEDISSCEEEDFF
SLSPSSSFSCPRPTHCDPQLDETAPVDENHFLSGNPARWSVDEVCQFISSLQGCEDLASQ
FLSQEIDGQALLLLKEEHLMSTMNIKLGPALKICASINSLRD
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaggagaagaccagaccaactccagctcagccaatagcagtgcagcatcaggg
ggaaactcccgccccccccagatagctcaaatgtctctctatgaaaggcaagctgtgcag
gctctgcaggcattacagaggcagcccaatgcagctcagtatttccagcagctgatgctg
cagcagcagatcaacagcgcgcaactccacaacctggctgctgtgcaacaggcaactctt
gcagccagtcgtcagtccagctctcccagtaacagcgtctctcaagctacaagcacagca
caatgcacagtgaacttaagtaccacttctggtggagggaccatgtcaaacccccgtccg
ataggacctgccaccttggcaacatcaacagcccttagccagtcagttttgttaggtgga
aactctggtggacagggtcagatgtacctgagagtaaaccgctctctcaagacacctctc
gcccctcagctcattttcatgcctggtggtacagcgacagctgctgtggcaacggttgcc
caacagcaaacccagcagcagcaacaagaaacaactcctacatcctcaagtaaccagtca
gacaatgatcaggtacagaacttggcaatgcgttgcgtgtccactccaagggtggctact
gtgaagaccgagtttgcagataggaaggagatgagtggttcatacccaattaaccagcaa
cctcagactcagcagcagtttggtcagtcagctcagcagatccaagcgcaggctcaaccg
ctcgccaacgccaaactgcaaaactactccaacaccaccaatcccaatatgtctggtctc
actgtgaagggcaccaatcaatccgctgtcaccccacagcaaacaggaggttcctccaac
cctccgtcctcctcgccttccccctcgctccctctctcccagctcctcctttctcaatct
ggcttgtgccaagctcgaggagtaccagctgctgcggccaccgtaacccacatcctggtg
cccacatccaatgttcccacatcttctcaaggctatccgatgggcacggtggcaaccaaa
tccaacatgactgcccagacgttagtagtgcagccactccagcagacgggggtgaatctg
ggctcggaaaagctgggtcatggaacagggcatgtgcccattcaacctaaaacggctcag
gggcatcggccgccagtgcagatgcaacctcgtcacccaccacccattctcccggcacca
cccaacaatggccaggccactgggggccatcaccctccccacgtcccagttcagctggtt
ggcgcaaggcagagcacactaggaaactcccaggcattagcggtggcccaggctcgggcc
tgttgtgcccagcaggacgccacagctgtcgtgcccgtcaataactccggtagcaatgct
gttactatgatgactccaggggaaacaggcggagccggcatgtgccttaaaacagcccaa
agtgccctcccaatgtctcagatgcagaccaatcagtgtgcagcgttgagtcttggcaat
tctgcatctgtcacacattcgatggatggacagaataactctggagactctgtgttcgtt
cagtctggaccagttcagacaaagcctgtgattggtcaattaaaaaggaaatcagaatcc
gatttacccaatgagatgtcaaccgaaaccatcaatgcaagtctgttaatgcaagactcc
gcccctcctctttcaccagctccctcactagatacagccccagagatggcattctcttct
cctcctactctctctctttctctccctcttcctcgtgttggaggacagggcgatcgagca
cctgtgccacaggctgtggtcaaacctcaggttctcactcacctcattgagggctttgtt
atccaggagggagccgaacctttccctgtgactgggccattgaaagaacttcctgtggct
gttccacccatcctacaccgagagaacatccgttctgataagttaaagtgtgaatactgt
caaagatttgcaccagccaaccagttcagacgatccaagcgcttctgttccaaaacctgt
gccaagaggtacaatgtcagctgcagtaaccactaccgtgttagtaggggtcttgagggt
gctgaacggccaccagggagtcctgttgtacaggatgttattgctaggcggaggggtcct
cgcaggagcagctctgaaattgcctgcgctaaaatatcaggcaggcatcttccagtaaag
tgtcgttcagaatctagtcgttctgaagacatctccagctgtgaggaagaagacttcttc
tcactctctcccagctcgtccttctcgtgcccaagaccaacccactgtgaccctcagttg
gatgaaacggcaccagtggatgagaaccacttcttatctgggaaccctgctcgctggagt
gtggacgaagtgtgtcagttcatttcttctcttcaaggttgtgaggacttggcgtctcag
ttcctgtcacaggagattgatgggcaggcgctgttgcttctcaaagaagagcatctcatg
tccactatgaacatcaaactcggtcctgctctcaaaatctgcgcgtctatcaacagtctg
agggattga
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