Pimephales promelas (fathead minnow): 120487265
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Entry
120487265 CDS
T08155
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120487265 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120487265 (hdac4)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120487265 (hdac4)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120487265 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
120487265
NCBI-ProteinID:
XP_039539498
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MLSVDVSVALPQQVPPSAIPMDLRVDHQFALAPTDPAQREHQLQQELLALKQKQQIQRQL
LIAEFQRQHEQLSRQHEAQLQEHVKHQQDLLALKHQQELLEHQRKLERHRQEQEMEKQQR
EQKLQLLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSLNHCLSSDPRYWYGKTQH
SSLDQSSPPQTGISTYNHQLLGMYDPKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLL
RRKDGQVTTAKKRSLDMAESACSSAPGSGPSSPNNSSNNITNENGIAGSISNSPMEPSLA
HRLAGREGPVSQLSLYTSPSLPNITLGLPATGPSSMASGQQDGERMAVPGIPITTPFMPG
AHLPSYLTASSLERESGSAHNTLLQHMVLLEQSAAQNSLAGLGGLPLQSHPIHKLRQHRP
LGRTQSAPLPQNAQALQQLVVQQQHQQFLEKHKQQFQQQQLHISKMMAKPNEPGRQHESH
PEETEEELREHQGLGDSSEGLPHGVIVKQEPLDEQDEEFSQRERQAEEELLFRQQALLLE
QQRIHQLRNYQASMEAAGLSVTFPGHRPLSRAQSSPASATFPIVVQEPAAKPRFTTGLVY
DTLMQKHQCMCGNSNIHPEHAGRIQSIWSRLQETGLRGQCECIRGRKATLEELQTVHSEA
HVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVDLVFK
VASGELRNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHG
NGTQQAFYSDPNILYLSLHRYDDGNFFPGSGAPDEVGIGPGVGFNVNMAFTGGLEPPMGD
TEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHQPPLGGYKLTAKCFGYLTKQLMGLA
GGRLVLALEGGHDLTAICDASEACVSALLGIELDPLPEDVLQQRPNPNAIHSMEKVLEVQ
SKYWRSLERSASTLGYSLLEAQRCETEEAETVTAMASLSVANKHMGKRTEEEPMEEEPPL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgttgatgtgagtgtggcactgccacagcaagtgccaccttctgccatcccc
atggacctgcgtgttgatcaccagttcgccctggcgccgacggacccggcccagcgtgag
catcagcttcagcaggagcttctggccctcaagcagaaacagcagatccagaggcagctc
ctgatcgcagagtttcagcggcagcacgagcagctctcacgccaacatgaagcgcaactg
caggagcatgtgaagcatcagcaggaccttctggccctgaaacatcagcaggagctcctg
gaacaccagcggaagttggagcgtcatcgtcaagaacaggagatggagaaacagcagcgg
gaacagaagctccagttactcaaaaacaaagaacgcggacaagagagcgctgtggcgagc
actgaggtgaagatgaggttgcaggagtttgtcctcaacaagaagaaagcgctggcccag
aggagcctcaaccactgcctgtccagtgacccgcgctactggtacgggaaaacccagcac
agctccctggaccagagctcaccacctcagacagggatttccacttacaaccaccagttg
ctgggaatgtacgaccccaaagatgacttcccgctccgcaagacagcatctgagcctaac
ctgaagctacgatccaggctgaagcagaaagttacagagcgcaggagtagcccgttgctt
cggcggaaagatgggcaggtcaccactgcaaagaaacgctctctggacatggcagaatcg
gcttgcagcagtgctcctggttctggtccaagttcacccaacaacagttcaaacaacatt
accaatgagaacggcatcgctggatccatctccaacagtccaatggagccatctttggca
cacagactcgccggcagagagggtcctgttagccagctgtctctgtacacatcgccctcc
cttcccaacatcaccctgggcctgccagccaccggcccttccagcatggcatccggccag
caggatggtgagagaatggcagtgccaggaatacccataaccactccgttcatgccagga
gcccacctgccgtcttacctgactgcttcctccttagagcgggagagcggctcggcacac
aacacactcctccagcatatggtgcttctggagcagtccgccgctcagaactccctcgca
ggcctgggtggcttgcccctgcagtcccatcccatccataagctccggcagcatcggccc
ctcggacgcacgcagtcggcccccctgccccagaacgcccaggcgctgcagcagctggtg
gttcaacagcaacaccagcagttcctggaaaaacacaagcaacagttccagcagcagcag
cttcacatcagcaagatgatggctaagccgaacgagccgggccgacagcacgagagccac
ccggaggagacggaggaggagctgagggagcaccaggggctgggagactcctccgagggt
cttcctcacggggtcatcgtcaaacaggaacctctggatgaacaggacgaagagttttcg
cagagagagagacaagctgaggaagagctgctgttcagacagcaagctctcctgttggag
caacagaggatccatcagctgaggaactatcaggcgtccatggaggcggccggactgtct
gtgaccttcccaggccatcggcccctgtccagggcacaatcgtccccagcctcggcgacc
tttcccattgtggtccaggaaccagcagccaaaccacgctttaccaccggactggtgtac
gacaccctgatgcagaaacaccagtgcatgtgtggaaacagtaacatccaccccgagcac
gccggacgcatccagagcatctggtctcgactgcaggagacaggactgcgcggccagtgt
gagtgtattcgaggcaggaaagccactttggaggagctgcagacggtccactctgaagcc
catgtgctgctctatggaaccaacccactcagacaaaaactggacagttcagtgactccc
atgttcgtgagactgccgtgcggaggaatcggggttgacagtgacactatctggaatgaa
gttcactcgtccagtgctgctcgtctggctgtgggatctgtggtggatctggtctttaag
gtggcttcgggagagttgaggaacggctttgctgtggttcgacctccaggacaccacgct
gaggagagcactcccatgggattttgctatttcaactcggtcgccattgcagccaaactc
ttacagcagagactcaacgtcagtaagattctcattgtggactgggatgttcaccatggc
aacgggactcaacaggccttctacagtgaccctaatatcctgtatctgtctctccatcgc
tacgatgatgggaacttcttccccggcagcggagcccccgatgaggtgggcatcggtcca
ggcgtgggctttaacgtgaacatggcattcaccggaggtctggagccgcccatgggggac
acggagtatctggcagcattcaggacggtggtgatgcctattgcgaatgagtttgctccg
gacgtggtgctggtttcttcaggcttcgacgctgtggagggccaccagcctcctctggga
gggtacaaactcacagccaaatgttttggctacctgaccaagcagctgatgggactggcc
ggcggccggctggtgctcgcgctggaggggggtcacgacctcaccgccatttgcgatgcc
tccgaagcatgtgtttctgctttacttggaatcgagttggatcctcttcctgaagacgtg
cttcaacagaggccgaaccccaatgccattcactccatggagaaagttctggaagtccag
agtaaatactggcgctcgctggagcgatctgcctcaactctgggctactctctgctggag
gctcagagatgtgaaaccgaagaagcagagacggtgaccgccatggcatccctgtctgtg
gccaacaagcacatggggaagaggacggaggaggagcctatggaagaggaacctccattg
tag
DBGET
integrated database retrieval system
