Pimephales promelas (fathead minnow): 120493971
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Entry
120493971 CDS
T08155
Symbol
grid1a
Name
(RefSeq) glutamate receptor ionotropic, delta-1
KO
K05206
glutamate receptor delta-1 subunit
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120493971 (grid1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120493971 (grid1a)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Glutamate (ionotropic)
120493971 (grid1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
120493971
NCBI-ProteinID:
XP_039548989
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MELLVISLSLWILQCRSARADSIIHIGAIFEQNAVRDDEVFQLAISDLSLNDDILQSERI
THSIKLIEPNNPFQAVQEACELMNQGILALVSSTGCAAANALQSLTDAMHIPHLFIQRNG
DGTPRAECQLNPSPDGERYTLAARPPVRLNDVMITLVSELRWHKFIVFYDSEYDVRGMRG
FLDQASRMGLDVSLQQVDRNVTKVFSTLFSTMRMEELNRYRDTLRRAILLLSPRTAQVFI
HQAVETNLASKDSHWVYANEEVSDTEIMELVHSALGRMTVIRQIFPLWRDSNIRCMRNNH
RISSLLCDPQEGYLQSLEVSSLYLYDSVLMLANAFYRKLDDRKWHSMASLNCMRKSTKPW
NGGWSMLDTIQKGRISGLTGLMDFRSNGANSHVQFEVLGTSYSETFGKDVKRLATWDSDR
GLNGSLRENRAEHGMQGVTLKVVTVLEEPFIMVAENILGQPKRYKGFSIDVLDALAKILG
FKYEMYQVADGKYGSPQANGSWNGMIGELIGKRADVAISAITITPERENVVDFSKRYLDY
SVGILMTKTEERLNIFSLLAPFDLAVWACIAAAIPVVGVMVFLLRRVQSVRSQNPPGPHQ
PASVTTSFQSAIWIVYGAFVQQGGESLMSSLALRIAMGSWWLFTLIVCSSYTANLAAYLT
VSRMDNAIRTFQDLSKQTELSYGTVRESAVFEYFRVKGTNPLEQDSTFSELWRTINKNQG
LDNSVISPTEGIHKVKRDPYAFLWDVAVLEYAALTDDDCTLVVTGNSMSSKGYGLALQHG
SPYRDLFSQKILDLQEKGDLDILKQKWWPRKGRCDLDKHVEPQPEGRALRLHSFAGVFCI
LAAGLLLACLVAALESWWNGPRCQRAQPKEDKEMDLEQVHQRLSGLMEDDLVHKQLPGQS
LEISALDMGSMRPQQSSQEAMRDFPRGGLSVTSFLQEGPGVGRVPGRSLPLPLSSSTLPP
SMRCKHRAPNGGLFRQSPVKTPMPISYQAVPVGPIPEAIDPSHGTSI
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctcgtgatcagcctctccttatggatcctgcagtgccgctcagctcgcgcg
gactccattattcacatcggagctatttttgaacaaaacgccgtacgggacgacgaggtt
tttcagcttgccatttcagacctgagtttgaatgacgacatcctccagagcgagaggatt
acccattctatcaaacttatcgagcccaacaaccccttccaggcagtacaggaagcctgt
gagctcatgaatcaggggatactggcattggtgtcatcgacgggatgtgcggcagccaac
gcgctacaatctctgacggacgccatgcacattcctcacctgttcattcagaggaacgga
gatggcacaccccgcgctgagtgccagctcaatcccagccccgacggagagcgctacacg
ctggccgcacgccctcctgtgcgtctaaatgatgtgatgatcacgctcgtctctgaactg
cgctggcacaagttcattgttttctatgatagcgagtacgatgtgcgggggatgcgtgga
ttcctagaccaggcgtctcggatgggtttggatgtgtctctacagcaggttgaccggaat
gtgacaaaggtcttttctaccctgttcagcacgatgaggatggaggagctgaaccgttac
cgggacacgctcagacgggccatcctgctgctcagccctcgtactgcccaggtcttcata
caccaggcagtggaaacgaatctagcatccaaagatagtcactgggtgtacgccaatgag
gaggttagtgacactgagataatggagcttgtccacagcgctctgggccggatgacagtg
atccggcagatcttccccctgtggagggactccaacatccgctgcatgaggaacaatcat
cggatctcctcgttgctctgcgacccacaggaagggtacctgcagtctctagaggtgtcc
agtctgtacctgtatgacagtgtgctgatgttggccaatgccttctaccggaagttagat
gacaggaagtggcatagcatggccagtctgaactgcatgaggaagtcaaccaagccttgg
aatggaggctggtccatgctggacaccatccaaaagggacggatttccgggctcactggt
ttaatggacttccgaagcaatggagcgaactctcatgtccagtttgaggtcctggggacc
agttacagtgagacatttggaaaagatgtaaagcggctggcgacatgggactctgaccgt
ggtttgaatggcagtctgagggagaaccgggccgagcatggcatgcagggagttactctg
aaagtggtgaccgtactggaggagcccttcataatggtggcagaaaacattctaggtcag
cccaaaagatataagggattttctatagatgttctggacgccctggccaaaattctgggc
tttaagtatgaaatgtatcaggtggctgatgggaaatatggatctcctcaggccaacggg
tcttggaacggaatgattggagagctaattggaaagagggcagatgtggctatttcagcc
atcaccatcactccggaacgagaaaacgtggtggacttcagtaaacgctatctggattat
tctgtgggaatcctgatgactaaaacagaagagagactcaatatcttctccttgctggca
ccgtttgacctggcagtgtgggcctgcattgctgctgccattcctgtggtgggtgtcatg
gtctttctgctccgacgcgtccagtctgtccgctcccagaatccccctgggccccaccag
cctgcttctgtcacgacatccttccaaagtgccatctggatcgtctacggagcctttgta
cagcaaggtggtgaatccctcatgagttcattggctctcaggattgcaatgggaagctgg
tggctattcacccttattgtctgttcatcttacacagccaacctggcagcctacctcact
gtgtcccgcatggataacgctattcgaacatttcaagacctttccaagcagacagaactg
agctacggaacggtgagagagtctgctgtgttcgagtatttcagggtgaagggcacgaac
cccctggagcaagacagcactttctcggagctgtggagaactatcaataaaaatcaggga
ctggacaactctgtgatctctcctactgaaggcatccacaaggtgaagcgggatccatac
gccttcctgtgggacgtggcggtgttagagtatgcagctctgacagatgatgattgtacg
ctggtggtcacaggaaacagcatgagcagcaaaggatatggcctggctctgcagcacggc
agcccctacagagatctcttctcgcagaagatccttgacctgcaggagaaaggagacctt
gacattctaaagcagaagtggtggcctcgaaaaggtcgctgcgatctggacaagcacgtg
gagcctcagccggagggacgtgccctgagactgcacagcttcgctggggtcttctgcatc
ctagcagcggggctgctgctggcctgcctagtggccgctctagagtcttggtggaacggg
ccacgctgccaacgggcacagcccaaagaggacaaagagatggatctggagcaggttcac
cagcgtttgagtgggctgatggaggacgatctggtgcacaagcagctgccaggtcagtct
ctggagatctctgccctggacatgggcagcatgcgtccacagcagagctcccaggaagcc
atgagagatttcccccgtgggggcctgtccgtgacttcgttcctccaagagggtcctggg
gtcggccgcgtgcccggacggagcctccccctccctctcagcagttccactctgccgccc
tccatgcgctgcaaacaccgggcgcccaacggaggccttttccgccagagccccgtaaag
acacctatgcccatctcttaccaggcagtacccgtgggacccatcccagaagccattgat
ccaagccatgggacctctatttga
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