Pseudomonas protegens Cab57: PPC_1203
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Entry
PPC_1203 CDS
T03613
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00300
Lysine biosynthesis
ppro01100
Metabolic pathways
ppro01120
Microbial metabolism in diverse environments
ppro01230
Biosynthesis of amino acids
Module
ppro_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPC_1203 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppro01002
]
PPC_1203 (dapE)
Enzymes [BR:
ppro01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PPC_1203 (dapE)
Peptidases and inhibitors [BR:
ppro01002
]
Metallo peptidases
Family M20
PPC_1203 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
BAO60550
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Position
complement(1347958..1349109)
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AA seq
383 aa
AA seq
DB search
MTAHAELSPTLQLACDLIRRPSVTPIDADCQKLMMQRLGDAGFKLEPMRIEDVDNFWASH
GQHEGPVLCFAGHTDVVPTGPVQAWQNDPFDALIDEHGMLCGRGAADMKGSLAAMLVAAE
RFVTDYPDHKGSVAFLITSDEEGPAHHGTKAVVERLAARKERLDWCIVGEPSSTSLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQ
ISNLNSGTGATNVIPGELTALFNFRFSTESTVEGLQQRVAAILDKHGLDWHVEWALSGLP
FLTEPGALLDAVSASIKQVTGRDTKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RVLASDLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccatgccgagctttcgccgaccctgcaacttgcctgtgatctgatccgtcgc
ccctcggtgacgccgatcgacgccgactgccagaagctgatgatgcagcgcctgggggat
gccggcttcaagctggaaccgatgcgcatcgaggacgtggacaacttctgggccagccat
ggccagcatgaaggcccggtgctgtgttttgccggccacaccgacgtggtgcctaccggc
ccggtccaggcctggcagaacgacccgttcgacgctctgatcgacgagcacggcatgctc
tgcggccgtggcgcagcggacatgaagggcagcctggcggccatgctggtggccgctgag
cgtttcgtcaccgactacccagaccacaagggctcggtagccttcctcatcaccagcgac
gaagaaggccccgcgcaccatggcaccaaggccgtggtggagcgcctggcggcacgcaag
gagcgcctggactggtgcatcgtcggtgagccttcgagcaccagcctggtgggcgacgta
gtcaagaacggccgccgcggctccctcggcgccaagctcaccgtgcgcggggtgcagggc
cacgtggcctatccgcacctggcgaagaacccgatccacctggcggcgccggccctggcg
gagctggcggcggagcactgggacgacggcaacgccttcttcccacccaccagtttccag
atctccaacctcaattccgggaccggcgccaccaacgtgattcccggtgaactgaccgcg
ctgttcaacttccgcttctccaccgaatccacggtggaaggcctgcagcagcgggtcgcg
gccatcctcgacaagcacggcctggactggcatgtggagtgggccctgtccggcctgccg
ttcctcaccgaacccggcgccctgctggacgcggtatcggccagcatcaagcaggtcacc
gggcgcgacaccaaggcctccaccagtggcggcacctccgacgggcgcttcatcgccacc
ctaggcacccaggtggtggaactgggcccggtcaacgccaccatccatcaggtcaacgag
cgggtactggccagcgacctcgatgtgctgaccgaaatctactaccagaccctgatcaag
ttgctcgcctga
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