Pseudomonas protegens Cab57: PPC_2930
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Entry
PPC_2930 CDS
T03613
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_2930
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ppro01504
]
PPC_2930
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPC_2930
Antimicrobial resistance genes [BR:
ppro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
PPC_2930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ALKL1_2
Motif
Other DBs
NCBI-ProteinID:
BAO62277
LinkDB
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Position
3233277..3234191
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AA seq
304 aa
AA seq
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MDRFNAMRVFTRIVELGGFAKAADSLQMPPASVTILIKQLEAHLGVQLLHRTTRQVSPTL
DGAAYYQRCVRLLADLEESEAAFSLARHNPRGLLRVDMPVGIGRLLVIPALPEFSARYPQ
IELEIGLNDRPVDLIREGVDCALRGGPALDESLVARPLAQLQQVTCASPGYLRQRGVPRT
PQELQGHQMVEYFSNVSGKRYGLEFFFAGQLQPVQLPKRVAVNSADGYLAACEAGYGLIQ
TPYYHVARQLQDATLQRVLEDYPLPALPLTALYPPQRHLSTRLRVFIDWLVELFARPGNH
ISCP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtttcaacgccatgcgcgtctttacccgtatcgtcgagctgggcggctttgcc
aaggctgccgacagtctgcagatgccgccggcttcggtgaccattctgatcaagcaactg
gaggcccatctgggggtgcagttgttgcaccgcaccacccgccaggtcagcccgaccctg
gacggagccgcctattaccagcgttgcgtacgcttgctggcggacctggaggagagtgag
gcggcgttctccctggcccggcacaacccccgtggcctgttgcgtgtcgatatgccggtg
ggcatcggccggttgctggtgataccggcgctgccggagttttccgcgcgctatccgcag
atcgaactggagatcggcctcaatgaccgcccggtggacctgatccgcgagggcgtggac
tgtgcgctgcgcggcggcccggccctggacgagagcctggtggcgcggccgctggcgcag
ttgcagcaagtcacctgtgccagccccgggtacctgcgccagcggggggttccccgtact
ccgcaagagctgcaagggcatcagatggtggagtatttctccaatgtcagcggcaagcgt
tatggcctggaattcttcttcgccggccagttgcagccggtgcagttgcccaaacgggtg
gcggtgaacagcgccgatggctacctggcggcctgcgaagccggctacgggctgatccag
accccgtactaccacgttgcccggcagttgcaggacgcgaccctgcagcgggtgctggag
gactacccgctgcctgcattgccgctgaccgcgctgtacccgccccagcggcacctgtcg
acccgcctgcgggtattcatcgattggctggtggagctgttcgcccgcccgggcaatcac
atttcttgcccctga
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